| Full name: TRPM2 antisense RNA | Alias Symbol: TRPM2-AS1 | ||
| Type: non-coding RNA | Cytoband: 21q22.3 | ||
| Entrez ID: 101928607 | HGNC ID: HGNC:50758 | Ensembl Gene: ENSG00000230061 | OMIM ID: |
Expression of TRPM2-AS:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRPM2-AS | 101928607 | 1564242_at | 0.1673 | 0.4865 | |
| GSE26886 | TRPM2-AS | 101928607 | 1564242_at | 0.1366 | 0.3578 | |
| GSE45670 | TRPM2-AS | 101928607 | 1564242_at | 0.0664 | 0.4311 | |
| GSE53622 | TRPM2-AS | 101928607 | 42054 | 0.5151 | 0.0000 | |
| GSE53624 | TRPM2-AS | 101928607 | 42054 | 0.5697 | 0.0000 | |
| GSE63941 | TRPM2-AS | 101928607 | 1564242_at | 0.1693 | 0.1683 | |
| GSE77861 | TRPM2-AS | 101928607 | 1564242_at | -0.0128 | 0.9255 | |
| SRP159526 | TRPM2-AS | 101928607 | RNAseq | 4.7798 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TRPM2-AS expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TRPM2-AS:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRPM2-AS | 101928607 | 2 | 8 | 20 | |
| GSE20123 | TRPM2-AS | 101928607 | 2 | 8 | 20 | |
| GSE43470 | TRPM2-AS | 101928607 | 0 | 13 | 30 | |
| GSE46452 | TRPM2-AS | 101928607 | 1 | 21 | 37 | |
| GSE47630 | TRPM2-AS | 101928607 | 6 | 17 | 17 | |
| GSE54993 | TRPM2-AS | 101928607 | 8 | 1 | 61 | |
| GSE54994 | TRPM2-AS | 101928607 | 4 | 8 | 41 | |
| GSE60625 | TRPM2-AS | 101928607 | 0 | 0 | 11 | |
| GSE74703 | TRPM2-AS | 101928607 | 0 | 10 | 26 | |
| GSE74704 | TRPM2-AS | 101928607 | 1 | 4 | 15 |
Total number of gains: 24; Total number of losses: 90; Total Number of normals: 278.
Somatic mutations of TRPM2-AS:
Generating mutation plots.
Highly correlated genes for TRPM2-AS:
Showing top 20/51 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRPM2-AS | ZNF469 | 0.716778 | 3 | 0 | 3 |
| TRPM2-AS | TLR9 | 0.705651 | 3 | 0 | 3 |
| TRPM2-AS | PRSS36 | 0.701014 | 3 | 0 | 3 |
| TRPM2-AS | ADAMTS14 | 0.680602 | 4 | 0 | 4 |
| TRPM2-AS | SYP | 0.646103 | 3 | 0 | 3 |
| TRPM2-AS | FOXS1 | 0.632659 | 3 | 0 | 3 |
| TRPM2-AS | DHX38 | 0.6191 | 3 | 0 | 3 |
| TRPM2-AS | POU4F1 | 0.617179 | 3 | 0 | 3 |
| TRPM2-AS | GPR4 | 0.613315 | 3 | 0 | 3 |
| TRPM2-AS | ADAMTS7 | 0.611773 | 4 | 0 | 3 |
| TRPM2-AS | PCYT1B | 0.603896 | 3 | 0 | 3 |
| TRPM2-AS | KLK1 | 0.603575 | 3 | 0 | 3 |
| TRPM2-AS | WNT7B | 0.601025 | 4 | 0 | 3 |
| TRPM2-AS | NYX | 0.595783 | 4 | 0 | 4 |
| TRPM2-AS | LINC00337 | 0.595622 | 5 | 0 | 4 |
| TRPM2-AS | DUSP15 | 0.587923 | 3 | 0 | 3 |
| TRPM2-AS | PATE1 | 0.578345 | 3 | 0 | 3 |
| TRPM2-AS | HOXC8 | 0.576819 | 3 | 0 | 3 |
| TRPM2-AS | PAGE1 | 0.574696 | 4 | 0 | 4 |
| TRPM2-AS | COL5A3 | 0.56933 | 3 | 0 | 3 |
For details and further investigation, click here
