| Full name: tubulin delta 1 | Alias Symbol: FLJ12709|TUBD | ||
| Type: protein-coding gene | Cytoband: 17q23.1 | ||
| Entrez ID: 51174 | HGNC ID: HGNC:16811 | Ensembl Gene: ENSG00000108423 | OMIM ID: 607344 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of TUBD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TUBD1 | 51174 | 210389_x_at | -0.1283 | 0.8253 | |
| GSE20347 | TUBD1 | 51174 | 210389_x_at | 0.1522 | 0.3599 | |
| GSE23400 | TUBD1 | 51174 | 210389_x_at | -0.0928 | 0.1153 | |
| GSE26886 | TUBD1 | 51174 | 231853_at | 0.5256 | 0.1497 | |
| GSE29001 | TUBD1 | 51174 | 210389_x_at | -0.1180 | 0.7702 | |
| GSE38129 | TUBD1 | 51174 | 210389_x_at | 0.1815 | 0.3005 | |
| GSE45670 | TUBD1 | 51174 | 210389_x_at | 0.4837 | 0.0002 | |
| GSE53622 | TUBD1 | 51174 | 59493 | 0.0029 | 0.9742 | |
| GSE53624 | TUBD1 | 51174 | 59493 | -0.2381 | 0.0038 | |
| GSE63941 | TUBD1 | 51174 | 210389_x_at | 1.8629 | 0.0018 | |
| GSE77861 | TUBD1 | 51174 | 231853_at | 0.1634 | 0.6267 | |
| GSE97050 | TUBD1 | 51174 | A_23_P26895 | 0.1489 | 0.6223 | |
| SRP007169 | TUBD1 | 51174 | RNAseq | 0.2129 | 0.6069 | |
| SRP008496 | TUBD1 | 51174 | RNAseq | -0.5647 | 0.0633 | |
| SRP064894 | TUBD1 | 51174 | RNAseq | -0.0349 | 0.8144 | |
| SRP133303 | TUBD1 | 51174 | RNAseq | 0.2610 | 0.1003 | |
| SRP159526 | TUBD1 | 51174 | RNAseq | -0.0372 | 0.8712 | |
| SRP193095 | TUBD1 | 51174 | RNAseq | -0.1085 | 0.3555 | |
| SRP219564 | TUBD1 | 51174 | RNAseq | -0.5783 | 0.1781 | |
| TCGA | TUBD1 | 51174 | RNAseq | 0.2065 | 0.0034 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TUBD1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TUBD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TUBD1 | 51174 | 6 | 1 | 23 | |
| GSE20123 | TUBD1 | 51174 | 6 | 1 | 23 | |
| GSE43470 | TUBD1 | 51174 | 5 | 0 | 38 | |
| GSE46452 | TUBD1 | 51174 | 32 | 0 | 27 | |
| GSE47630 | TUBD1 | 51174 | 7 | 1 | 32 | |
| GSE54993 | TUBD1 | 51174 | 2 | 5 | 63 | |
| GSE54994 | TUBD1 | 51174 | 7 | 5 | 41 | |
| GSE60625 | TUBD1 | 51174 | 4 | 0 | 7 | |
| GSE74703 | TUBD1 | 51174 | 5 | 0 | 31 | |
| GSE74704 | TUBD1 | 51174 | 5 | 1 | 14 | |
| TCGA | TUBD1 | 51174 | 31 | 7 | 58 |
Total number of gains: 110; Total number of losses: 21; Total Number of normals: 357.
Somatic mutations of TUBD1:
Generating mutation plots.
Highly correlated genes for TUBD1:
Showing top 20/204 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TUBD1 | SEMA4B | 0.735321 | 3 | 0 | 3 |
| TUBD1 | BLM | 0.704506 | 3 | 0 | 3 |
| TUBD1 | PTGR2 | 0.701455 | 3 | 0 | 3 |
| TUBD1 | FNBP1L | 0.696082 | 3 | 0 | 3 |
| TUBD1 | MED30 | 0.663784 | 3 | 0 | 3 |
| TUBD1 | ACTR2 | 0.653803 | 4 | 0 | 4 |
| TUBD1 | C19orf33 | 0.649101 | 3 | 0 | 3 |
| TUBD1 | MPZL3 | 0.644341 | 3 | 0 | 3 |
| TUBD1 | SYT7 | 0.642387 | 3 | 0 | 3 |
| TUBD1 | LSM4 | 0.636608 | 3 | 0 | 3 |
| TUBD1 | MAGT1 | 0.636115 | 4 | 0 | 3 |
| TUBD1 | MTM1 | 0.634149 | 4 | 0 | 3 |
| TUBD1 | HOXB7 | 0.630158 | 4 | 0 | 4 |
| TUBD1 | TTK | 0.630105 | 4 | 0 | 3 |
| TUBD1 | USP1 | 0.629815 | 4 | 0 | 3 |
| TUBD1 | UBE2T | 0.628661 | 4 | 0 | 3 |
| TUBD1 | DEPDC4 | 0.625985 | 3 | 0 | 3 |
| TUBD1 | ANP32E | 0.625713 | 3 | 0 | 3 |
| TUBD1 | NUDCD2 | 0.625292 | 5 | 0 | 4 |
| TUBD1 | ZNF117 | 0.622293 | 4 | 0 | 4 |
For details and further investigation, click here
