C19orf33

 

Full name: chromosome 19 open reading frame 33 Alias Symbol: IMUP-1|IMUP-2|H2RSP|IMUP
Type: protein-coding gene Cytoband: 19q13.2
Entrez ID: 64073 HGNC ID: HGNC:16668 Ensembl Gene: ENSG00000167644 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C19orf33:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C19orf33 64073 223631_s_at -2.2085 0.1704
GSE26886 C19orf33 64073 223631_s_at -0.1609 0.7219
GSE45670 C19orf33 64073 223631_s_at -0.5042 0.2528
GSE53622 C19orf33 64073 37891 -1.4663 0.0000
GSE53624 C19orf33 64073 37891 -1.7253 0.0000
GSE63941 C19orf33 64073 223631_s_at 5.4089 0.0001
GSE77861 C19orf33 64073 223631_s_at -0.8061 0.0050
GSE97050 C19orf33 64073 A_23_P208788 -0.4675 0.7671
SRP007169 C19orf33 64073 RNAseq -2.6444 0.0001
SRP008496 C19orf33 64073 RNAseq -2.8996 0.0000
SRP064894 C19orf33 64073 RNAseq -1.6541 0.0003
SRP133303 C19orf33 64073 RNAseq -1.1311 0.0065
SRP159526 C19orf33 64073 RNAseq -2.7469 0.0020
SRP193095 C19orf33 64073 RNAseq -2.0818 0.0000
SRP219564 C19orf33 64073 RNAseq -1.6700 0.1246
TCGA C19orf33 64073 RNAseq 0.1054 0.6695

Upregulated datasets: 1; Downregulated datasets: 8.  


 

Survival by C19orf33 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C19orf33:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C19orf33 64073 7 4 19
GSE20123 C19orf33 64073 7 3 20
GSE43470 C19orf33 64073 4 10 29
GSE46452 C19orf33 64073 47 2 10
GSE47630 C19orf33 64073 9 5 26
GSE54993 C19orf33 64073 17 3 50
GSE54994 C19orf33 64073 6 9 38
GSE60625 C19orf33 64073 9 0 2
GSE74703 C19orf33 64073 4 6 26
GSE74704 C19orf33 64073 7 1 12
TCGA C19orf33 64073 17 15 64

Total number of gains: 134; Total number of losses: 58; Total Number of normals: 296.  


 

Somatic mutations of C19orf33:

 

Generating mutation plots.

 

Highly correlated genes for C19orf33:

 

Showing top 20/1014 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C19orf33CWH430.79495505
C19orf33RETSAT0.776255303
C19orf33EPGN0.772348303
C19orf33PKP30.772016808
C19orf33RAB250.755655707
C19orf33PPP1R13L0.753546909
C19orf33SLC25A390.751903303
C19orf33MXD10.746908505
C19orf33CYSRT10.746403505
C19orf33YOD10.745718606
C19orf33TOM1L20.743309505
C19orf33TMEM1540.739071605
C19orf33CKMT1A0.73639303
C19orf33PRSS270.734947606
C19orf33C1orf1160.73439808
C19orf33TPD52L10.734147606
C19orf33SYTL10.732157707
C19orf33FRMD4B0.731028706
C19orf33EPS8L20.729835605
C19orf33WWC10.727447707

For details and further investigation, click here