TXNIP

 

Full name: thioredoxin interacting protein Alias Symbol: VDUP1|EST01027|HHCPA78|THIF|ARRDC6
Type: protein-coding gene Cytoband: 1q21.1
Entrez ID: 10628 HGNC ID: HGNC:16952 Ensembl Gene: ENSG00000265972 OMIM ID: 606599
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of TXNIP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TXNIP 10628 201010_s_at -0.9160 0.3210
GSE20347 TXNIP 10628 201009_s_at -0.2335 0.4578
GSE23400 TXNIP 10628 201010_s_at -0.5606 0.0001
GSE26886 TXNIP 10628 201010_s_at -0.7486 0.1678
GSE29001 TXNIP 10628 201010_s_at -0.5145 0.0679
GSE38129 TXNIP 10628 201010_s_at -0.7049 0.0147
GSE45670 TXNIP 10628 201010_s_at -1.4004 0.0015
GSE53622 TXNIP 10628 6395 -1.1005 0.0000
GSE53624 TXNIP 10628 6395 -1.0797 0.0000
GSE63941 TXNIP 10628 201010_s_at 0.4120 0.8221
GSE77861 TXNIP 10628 201010_s_at -1.0381 0.1265
GSE97050 TXNIP 10628 A_23_P97700 -1.6664 0.0555
SRP007169 TXNIP 10628 RNAseq -0.2914 0.4994
SRP008496 TXNIP 10628 RNAseq 0.1028 0.7396
SRP064894 TXNIP 10628 RNAseq -0.5356 0.0918
SRP133303 TXNIP 10628 RNAseq -0.3232 0.2648
SRP159526 TXNIP 10628 RNAseq 0.0606 0.9309
SRP193095 TXNIP 10628 RNAseq -0.6231 0.0072
SRP219564 TXNIP 10628 RNAseq -0.4983 0.2719
TCGA TXNIP 10628 RNAseq -0.5056 0.0000

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by TXNIP expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TXNIP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TXNIP 10628 13 0 17
GSE20123 TXNIP 10628 13 0 17
GSE43470 TXNIP 10628 5 2 36
GSE46452 TXNIP 10628 2 1 56
GSE47630 TXNIP 10628 12 2 26
GSE54993 TXNIP 10628 0 2 68
GSE54994 TXNIP 10628 15 0 38
GSE60625 TXNIP 10628 0 0 11
GSE74703 TXNIP 10628 5 2 29
GSE74704 TXNIP 10628 6 0 14
TCGA TXNIP 10628 33 15 48

Total number of gains: 104; Total number of losses: 24; Total Number of normals: 360.  


 

Somatic mutations of TXNIP:

 

Generating mutation plots.

 

Highly correlated genes for TXNIP:

 

Showing top 20/1082 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TXNIPMACROD20.830898303
TXNIPCYP4V20.813769303
TXNIPCEP440.806791303
TXNIPCLEC3B0.799792303
TXNIPHNRNPA00.797674303
TXNIPANGPTL10.782485505
TXNIPKCNB10.777211404
TXNIPMAMDC20.753305505
TXNIPPARD3B0.753263404
TXNIPSORCS10.751673404
TXNIPRAB9B0.748979505
TXNIPKDM5D0.746776303
TXNIPCYP21A20.742337303
TXNIPTNS10.740549707
TXNIPGNPDA20.739661404
TXNIPMRVI10.739095504
TXNIPITGA90.738055505
TXNIPZNF4410.73285606
TXNIPNKAPL0.729971404
TXNIPING30.728517303

For details and further investigation, click here