SORCS1

 

Full name: sortilin related VPS10 domain containing receptor 1 Alias Symbol: sorCS1
Type: protein-coding gene Cytoband: 10q25.1
Entrez ID: 114815 HGNC ID: HGNC:16697 Ensembl Gene: ENSG00000108018 OMIM ID: 606283
Drug and gene relationship at DGIdb

 

Expression of SORCS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SORCS1 114815 228194_s_at -0.9883 0.2059
GSE26886 SORCS1 114815 228194_s_at 0.0574 0.6215
GSE45670 SORCS1 114815 1556891_at -0.0254 0.8017
GSE53622 SORCS1 114815 87113 -2.4860 0.0000
GSE53624 SORCS1 114815 87113 -2.3467 0.0000
GSE63941 SORCS1 114815 1556891_at 0.0749 0.5963
GSE77861 SORCS1 114815 1556891_at -0.0635 0.6146
GSE97050 SORCS1 114815 A_33_P3414192 -0.7009 0.2027
SRP064894 SORCS1 114815 RNAseq -0.3859 0.4714
SRP133303 SORCS1 114815 RNAseq -2.6903 0.0000
SRP159526 SORCS1 114815 RNAseq -1.9480 0.0294
TCGA SORCS1 114815 RNAseq -2.1250 0.0001

Upregulated datasets: 0; Downregulated datasets: 5.  


 

Survival by SORCS1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SORCS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SORCS1 114815 1 9 20
GSE20123 SORCS1 114815 1 8 21
GSE43470 SORCS1 114815 0 7 36
GSE46452 SORCS1 114815 0 11 48
GSE47630 SORCS1 114815 2 14 24
GSE54993 SORCS1 114815 8 0 62
GSE54994 SORCS1 114815 1 10 42
GSE60625 SORCS1 114815 0 0 11
GSE74703 SORCS1 114815 0 5 31
GSE74704 SORCS1 114815 1 4 15
TCGA SORCS1 114815 5 30 61

Total number of gains: 19; Total number of losses: 98; Total Number of normals: 371.  


 

Somatic mutations of SORCS1:

 

Generating mutation plots.

 

Highly correlated genes for SORCS1:

 

Showing top 20/911 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SORCS1XKR40.918393404
SORCS1CASQ20.901502404
SORCS1ANO50.896959404
SORCS1HPSE20.895664404
SORCS1ARHGAP60.892831404
SORCS1CYP21A20.885012303
SORCS1KCNB10.884725404
SORCS1ASPA0.883861404
SORCS1C1QTNF70.883771404
SORCS1CCDC690.881189404
SORCS1MYOC0.88005404
SORCS1NCAM10.879797404
SORCS1PDE5A0.878554404
SORCS1CLEC3B0.876006303
SORCS1PGR0.874189404
SORCS1CACNB20.873892404
SORCS1ASB50.868742404
SORCS1SCN7A0.865978404
SORCS1MAMDC20.863761404
SORCS1MRVI10.861754404

For details and further investigation, click here