UBAP2L

 

Full name: ubiquitin associated protein 2 like Alias Symbol: NICE-4|KIAA0144
Type: protein-coding gene Cytoband: 1q21.3
Entrez ID: 9898 HGNC ID: HGNC:29877 Ensembl Gene: ENSG00000143569 OMIM ID: 616472
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of UBAP2L:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 UBAP2L 9898 201377_at 0.9369 0.0298
GSE20347 UBAP2L 9898 201377_at 1.0010 0.0000
GSE23400 UBAP2L 9898 201377_at 0.6681 0.0000
GSE26886 UBAP2L 9898 201377_at 0.5681 0.0088
GSE29001 UBAP2L 9898 201377_at 0.8200 0.0031
GSE38129 UBAP2L 9898 201377_at 1.0460 0.0000
GSE45670 UBAP2L 9898 201377_at 0.3285 0.0117
GSE53622 UBAP2L 9898 110726 0.0781 0.1035
GSE53624 UBAP2L 9898 110726 0.1863 0.0001
GSE63941 UBAP2L 9898 201377_at 0.3448 0.3514
GSE77861 UBAP2L 9898 201378_s_at 0.5425 0.0203
GSE97050 UBAP2L 9898 A_24_P290927 0.0936 0.6257
SRP007169 UBAP2L 9898 RNAseq 0.8940 0.0112
SRP008496 UBAP2L 9898 RNAseq 1.3403 0.0000
SRP064894 UBAP2L 9898 RNAseq 0.2548 0.0827
SRP133303 UBAP2L 9898 RNAseq 0.2948 0.0257
SRP159526 UBAP2L 9898 RNAseq 0.6317 0.0008
SRP193095 UBAP2L 9898 RNAseq 0.4557 0.0002
SRP219564 UBAP2L 9898 RNAseq 0.6316 0.0665
TCGA UBAP2L 9898 RNAseq 0.1262 0.0018

Upregulated datasets: 3; Downregulated datasets: 0.  

 

Survival by UBAP2L expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of UBAP2L:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 UBAP2L 9898 14 0 16
GSE20123 UBAP2L 9898 14 0 16
GSE43470 UBAP2L 9898 7 2 34
GSE46452 UBAP2L 9898 2 1 56
GSE47630 UBAP2L 9898 14 0 26
GSE54993 UBAP2L 9898 0 4 66
GSE54994 UBAP2L 9898 16 0 37
GSE60625 UBAP2L 9898 0 0 11
GSE74703 UBAP2L 9898 6 1 29
GSE74704 UBAP2L 9898 7 0 13
TCGA UBAP2L 9898 38 2 56

Total number of gains: 118; Total number of losses: 10; Total Number of normals: 360.  

 

Somatic mutations of UBAP2L:

 

Generating mutation plots.

 

Highly correlated genes for UBAP2L:

 

Showing top 20/1823 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
UBAP2LUSP360.803398303
UBAP2LRLIM0.788735303
UBAP2LC12orf450.777852303
UBAP2LPPP1R370.773125303
UBAP2LFCHO10.76756303
UBAP2LSLC39A30.766454404
UBAP2LWDR50.764078403
UBAP2LZBTB20.7467303
UBAP2LDYRK20.744443403
UBAP2LEXOC60.744235303
UBAP2LTTC7B0.743885303
UBAP2LDNAJC20.74315807
UBAP2LLEMD20.741584403
UBAP2LAGO20.738899404
UBAP2LTP53I130.738266403
UBAP2LRILPL10.736814303
UBAP2LAKT20.735654303
UBAP2LFZD60.734121807
UBAP2LZNF4510.733947403
UBAP2LRAB11FIP30.732369303

For details and further investigation, click here