| Full name: V-set and transmembrane domain containing 1 | Alias Symbol: UNQ3033 | ||
| Type: protein-coding gene | Cytoband: 19q13.42 | ||
| Entrez ID: 284415 | HGNC ID: HGNC:29455 | Ensembl Gene: ENSG00000189068 | OMIM ID: 616804 |
| Drug and gene relationship at DGIdb | |||
Expression of VSTM1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VSTM1 | 284415 | 235818_at | -0.0982 | 0.6280 | |
| GSE26886 | VSTM1 | 284415 | 235818_at | -0.1111 | 0.1989 | |
| GSE45670 | VSTM1 | 284415 | 235818_at | -0.0098 | 0.9340 | |
| GSE53622 | VSTM1 | 284415 | 13714 | 0.4109 | 0.0370 | |
| GSE53624 | VSTM1 | 284415 | 60717 | 0.7792 | 0.0033 | |
| GSE63941 | VSTM1 | 284415 | 235818_at | 0.0848 | 0.5579 | |
| GSE77861 | VSTM1 | 284415 | 235818_at | -0.1849 | 0.0169 | |
| SRP133303 | VSTM1 | 284415 | RNAseq | 0.4397 | 0.0242 | |
| SRP193095 | VSTM1 | 284415 | RNAseq | 0.1695 | 0.2662 | |
| TCGA | VSTM1 | 284415 | RNAseq | 0.9923 | 0.4830 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by VSTM1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of VSTM1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | VSTM1 | 284415 | 3 | 4 | 23 | |
| GSE20123 | VSTM1 | 284415 | 3 | 3 | 24 | |
| GSE43470 | VSTM1 | 284415 | 2 | 11 | 30 | |
| GSE46452 | VSTM1 | 284415 | 45 | 1 | 13 | |
| GSE47630 | VSTM1 | 284415 | 8 | 6 | 26 | |
| GSE54993 | VSTM1 | 284415 | 17 | 4 | 49 | |
| GSE54994 | VSTM1 | 284415 | 4 | 14 | 35 | |
| GSE60625 | VSTM1 | 284415 | 9 | 0 | 2 | |
| GSE74703 | VSTM1 | 284415 | 2 | 7 | 27 | |
| GSE74704 | VSTM1 | 284415 | 3 | 1 | 16 | |
| TCGA | VSTM1 | 284415 | 19 | 15 | 62 |
Total number of gains: 115; Total number of losses: 66; Total Number of normals: 307.
Somatic mutations of VSTM1:
Generating mutation plots.
Highly correlated genes for VSTM1:
Showing top 20/27 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VSTM1 | FAM71C | 0.640944 | 4 | 0 | 3 |
| VSTM1 | TMEM114 | 0.63293 | 3 | 0 | 3 |
| VSTM1 | PLA2G2A | 0.626923 | 3 | 0 | 3 |
| VSTM1 | ETHE1 | 0.62571 | 3 | 0 | 3 |
| VSTM1 | FOXN4 | 0.607416 | 3 | 0 | 3 |
| VSTM1 | DLX6 | 0.59612 | 4 | 0 | 3 |
| VSTM1 | ARL16 | 0.586717 | 3 | 0 | 3 |
| VSTM1 | CRIP2 | 0.582441 | 3 | 0 | 3 |
| VSTM1 | VASN | 0.582345 | 3 | 0 | 3 |
| VSTM1 | SLC9A3 | 0.577801 | 3 | 0 | 3 |
| VSTM1 | SOX21-AS1 | 0.573072 | 3 | 0 | 3 |
| VSTM1 | PON1 | 0.572946 | 3 | 0 | 3 |
| VSTM1 | TRH | 0.572557 | 3 | 0 | 3 |
| VSTM1 | HAAO | 0.567278 | 4 | 0 | 3 |
| VSTM1 | DLGAP2 | 0.564353 | 5 | 0 | 3 |
| VSTM1 | MCHR2 | 0.563468 | 4 | 0 | 3 |
| VSTM1 | LIMD1-AS1 | 0.560591 | 4 | 0 | 3 |
| VSTM1 | GBP6 | 0.553041 | 3 | 0 | 3 |
| VSTM1 | ESX1 | 0.548473 | 3 | 0 | 3 |
| VSTM1 | PTPN5 | 0.54062 | 4 | 0 | 3 |
For details and further investigation, click here
