| Full name: family with sequence similarity 71 member C | Alias Symbol: MGC39520 | ||
| Type: protein-coding gene | Cytoband: 12q23.1 | ||
| Entrez ID: 196472 | HGNC ID: HGNC:28594 | Ensembl Gene: ENSG00000180219 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of FAM71C:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FAM71C | 196472 | 1552526_at | -0.2490 | 0.3169 | |
| GSE26886 | FAM71C | 196472 | 1552526_at | -0.5073 | 0.0002 | |
| GSE45670 | FAM71C | 196472 | 1552526_at | 0.0151 | 0.9165 | |
| GSE53622 | FAM71C | 196472 | 118800 | -0.1751 | 0.4068 | |
| GSE53624 | FAM71C | 196472 | 118800 | -0.0645 | 0.6211 | |
| GSE63941 | FAM71C | 196472 | 1552526_at | 0.0101 | 0.9574 | |
| GSE77861 | FAM71C | 196472 | 1552526_at | -0.2957 | 0.0322 | |
| TCGA | FAM71C | 196472 | RNAseq | 0.6027 | 0.7445 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by FAM71C expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of FAM71C:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FAM71C | 196472 | 1 | 3 | 26 | |
| GSE20123 | FAM71C | 196472 | 1 | 3 | 26 | |
| GSE43470 | FAM71C | 196472 | 2 | 0 | 41 | |
| GSE46452 | FAM71C | 196472 | 9 | 1 | 49 | |
| GSE47630 | FAM71C | 196472 | 9 | 1 | 30 | |
| GSE54993 | FAM71C | 196472 | 0 | 5 | 65 | |
| GSE54994 | FAM71C | 196472 | 4 | 2 | 47 | |
| GSE60625 | FAM71C | 196472 | 0 | 0 | 11 | |
| GSE74703 | FAM71C | 196472 | 2 | 0 | 34 | |
| GSE74704 | FAM71C | 196472 | 1 | 2 | 17 | |
| TCGA | FAM71C | 196472 | 16 | 11 | 69 |
Total number of gains: 45; Total number of losses: 28; Total Number of normals: 415.
Somatic mutations of FAM71C:
Generating mutation plots.
Highly correlated genes for FAM71C:
Showing top 20/368 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FAM71C | CHMP2A | 0.772266 | 3 | 0 | 3 |
| FAM71C | CMPK1 | 0.761383 | 3 | 0 | 3 |
| FAM71C | ST6GALNAC1 | 0.749392 | 3 | 0 | 3 |
| FAM71C | HCAR3 | 0.748899 | 3 | 0 | 3 |
| FAM71C | ANKRD13A | 0.748537 | 3 | 0 | 3 |
| FAM71C | BRK1 | 0.742085 | 3 | 0 | 3 |
| FAM71C | PRSS2 | 0.741761 | 3 | 0 | 3 |
| FAM71C | SNX11 | 0.739791 | 3 | 0 | 3 |
| FAM71C | TMEM59 | 0.733286 | 3 | 0 | 3 |
| FAM71C | RAB11A | 0.727669 | 3 | 0 | 3 |
| FAM71C | ZFAND2B | 0.725709 | 3 | 0 | 3 |
| FAM71C | ACPP | 0.723249 | 3 | 0 | 3 |
| FAM71C | FAM3D | 0.719721 | 3 | 0 | 3 |
| FAM71C | ORMDL2 | 0.717897 | 3 | 0 | 3 |
| FAM71C | ETHE1 | 0.713522 | 3 | 0 | 3 |
| FAM71C | MPP7 | 0.710743 | 3 | 0 | 3 |
| FAM71C | GNAI3 | 0.7084 | 3 | 0 | 3 |
| FAM71C | SMAGP | 0.70621 | 3 | 0 | 3 |
| FAM71C | LMO2 | 0.70309 | 3 | 0 | 3 |
| FAM71C | EMP1 | 0.701432 | 3 | 0 | 3 |
For details and further investigation, click here
