PSME3

 

Full name: proteasome activator subunit 3 Alias Symbol: Ki|PA28-gamma|REG-GAMMA|PA28G
Type: protein-coding gene Cytoband: 17q21.31
Entrez ID: 10197 HGNC ID: HGNC:9570 Ensembl Gene: ENSG00000131467 OMIM ID: 605129
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

PSME3 involved pathways:

KEGG pathway Description View
hsa04612Antigen processing and presentation

 

Expression of PSME3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PSME3 10197 209852_x_at 0.5614 0.1511
GSE20347 PSME3 10197 209852_x_at 0.2502 0.1226
GSE23400 PSME3 10197 209852_x_at 0.4184 0.0000
GSE26886 PSME3 10197 209852_x_at -0.3813 0.3653
GSE29001 PSME3 10197 209852_x_at 0.0978 0.8073
GSE38129 PSME3 10197 209852_x_at 0.5101 0.0003
GSE45670 PSME3 10197 200987_x_at 0.6166 0.0005
GSE53622 PSME3 10197 15775 0.3785 0.0000
GSE53624 PSME3 10197 15775 0.4907 0.0000
GSE63941 PSME3 10197 200987_x_at 0.7204 0.0871
GSE77861 PSME3 10197 209852_x_at 0.6093 0.0048
GSE97050 PSME3 10197 A_23_P164141 0.5846 0.1725
SRP007169 PSME3 10197 RNAseq 0.3323 0.3323
SRP008496 PSME3 10197 RNAseq 0.1546 0.4277
SRP064894 PSME3 10197 RNAseq 0.1693 0.2727
SRP133303 PSME3 10197 RNAseq 0.5171 0.0001
SRP159526 PSME3 10197 RNAseq 0.2317 0.4291
SRP193095 PSME3 10197 RNAseq 0.2337 0.0271
SRP219564 PSME3 10197 RNAseq 0.1117 0.7332
TCGA PSME3 10197 RNAseq 0.1127 0.0075

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by PSME3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PSME3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PSME3 10197 6 2 22
GSE20123 PSME3 10197 6 2 22
GSE43470 PSME3 10197 1 2 40
GSE46452 PSME3 10197 34 0 25
GSE47630 PSME3 10197 8 1 31
GSE54993 PSME3 10197 3 4 63
GSE54994 PSME3 10197 8 5 40
GSE60625 PSME3 10197 4 0 7
GSE74703 PSME3 10197 1 1 34
GSE74704 PSME3 10197 4 1 15
TCGA PSME3 10197 22 7 67

Total number of gains: 97; Total number of losses: 25; Total Number of normals: 366.  


 

Somatic mutations of PSME3:

 

Generating mutation plots.

 

Highly correlated genes for PSME3:

 

Showing top 20/1324 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PSME3OLFM20.74806303
PSME3WIPI10.746148303
PSME3GMCL10.730863303
PSME3TUBG10.7281461009
PSME3PHTF10.727043303
PSME3KCTD130.72568303
PSME3TADA30.721637404
PSME3CMIP0.719351505
PSME3SPNS10.718115505
PSME3EFTUD20.716326807
PSME3LRRC590.713106908
PSME3RAB11B0.710087303
PSME3IRF2BPL0.707542303
PSME3KTI120.707007403
PSME3CLEC11A0.698514303
PSME3SFT2D30.698127303
PSME3LDLRAP10.697808403
PSME3PPP1R9B0.697642404
PSME3TPM30.694211706
PSME3MTCH20.692569505

For details and further investigation, click here