YIPF5

 

Full name: Yip1 domain family member 5 Alias Symbol: SMAP-5|FinGER5
Type: protein-coding gene Cytoband: 5q31.3
Entrez ID: 81555 HGNC ID: HGNC:24877 Ensembl Gene: ENSG00000145817 OMIM ID: 611483
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of YIPF5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 YIPF5 81555 224934_at -0.5125 0.4305
GSE20347 YIPF5 81555 221423_s_at -0.4816 0.0153
GSE23400 YIPF5 81555 221423_s_at 0.0185 0.8034
GSE26886 YIPF5 81555 224934_at 0.4768 0.0564
GSE29001 YIPF5 81555 221423_s_at -0.0331 0.8693
GSE38129 YIPF5 81555 221423_s_at -0.0534 0.8056
GSE45670 YIPF5 81555 224934_at 0.0537 0.7011
GSE53622 YIPF5 81555 45138 -0.0901 0.1117
GSE53624 YIPF5 81555 45138 -0.2533 0.0200
GSE63941 YIPF5 81555 224934_at -1.3192 0.0047
GSE77861 YIPF5 81555 224934_at -0.3041 0.3023
GSE97050 YIPF5 81555 A_23_P18806 0.2526 0.2699
SRP007169 YIPF5 81555 RNAseq -0.7536 0.0091
SRP008496 YIPF5 81555 RNAseq -0.6947 0.0000
SRP064894 YIPF5 81555 RNAseq 0.0358 0.8160
SRP133303 YIPF5 81555 RNAseq 0.4486 0.0482
SRP159526 YIPF5 81555 RNAseq -0.3660 0.3711
SRP193095 YIPF5 81555 RNAseq -0.5715 0.0000
SRP219564 YIPF5 81555 RNAseq 0.0098 0.9748
TCGA YIPF5 81555 RNAseq -0.1048 0.0325

Upregulated datasets: 0; Downregulated datasets: 1.  

 

Survival by YIPF5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of YIPF5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 YIPF5 81555 1 11 18
GSE20123 YIPF5 81555 1 11 18
GSE43470 YIPF5 81555 2 9 32
GSE46452 YIPF5 81555 0 27 32
GSE47630 YIPF5 81555 0 20 20
GSE54993 YIPF5 81555 9 1 60
GSE54994 YIPF5 81555 2 14 37
GSE60625 YIPF5 81555 0 0 11
GSE74703 YIPF5 81555 2 7 27
GSE74704 YIPF5 81555 1 6 13
TCGA YIPF5 81555 3 38 55

Total number of gains: 21; Total number of losses: 144; Total Number of normals: 323.  

 

Somatic mutations of YIPF5:

 

Generating mutation plots.

 

Highly correlated genes for YIPF5:

 

Showing top 20/100 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
YIPF5DOCK40.685678404
YIPF5CCL240.671087303
YIPF5CNEP1R10.670555403
YIPF5DOCK20.666755404
YIPF5CMTR20.660932303
YIPF5YIPF60.659334303
YIPF5FAM207A0.657654303
YIPF5PGM30.654726403
YIPF5GALNT90.644162303
YIPF5ECM10.643512303
YIPF5C4orf30.633852303
YIPF5IGFL10.627644303
YIPF5MILR10.627035303
YIPF5C8orf480.6252303
YIPF5PEX30.620224605
YIPF5UACA0.616642303
YIPF5ZNF3300.613193404
YIPF5IL1RN0.611297303
YIPF5IPPK0.602589303
YIPF5CUTC0.602104303

For details and further investigation, click here