ZFYVE19

 

Full name: zinc finger FYVE-type containing 19 Alias Symbol: FLJ14840|ANCHR
Type: protein-coding gene Cytoband: 15q15.1
Entrez ID: 84936 HGNC ID: HGNC:20758 Ensembl Gene: ENSG00000166140 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ZFYVE19:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZFYVE19 84936 225843_at -0.0205 0.9593
GSE26886 ZFYVE19 84936 225843_at -0.1828 0.3919
GSE45670 ZFYVE19 84936 225843_at -0.2975 0.0842
GSE53622 ZFYVE19 84936 31823 -0.4729 0.0000
GSE53624 ZFYVE19 84936 31823 -0.4075 0.0000
GSE63941 ZFYVE19 84936 225843_at 0.5524 0.2066
GSE77861 ZFYVE19 84936 225843_at 0.0321 0.8208
GSE97050 ZFYVE19 84936 A_23_P65930 -0.1405 0.5463
SRP007169 ZFYVE19 84936 RNAseq -1.9102 0.0001
SRP008496 ZFYVE19 84936 RNAseq -1.7561 0.0000
SRP064894 ZFYVE19 84936 RNAseq -0.1995 0.4510
SRP133303 ZFYVE19 84936 RNAseq -0.3123 0.0555
SRP159526 ZFYVE19 84936 RNAseq -0.3918 0.0624
SRP193095 ZFYVE19 84936 RNAseq -0.2826 0.0016
SRP219564 ZFYVE19 84936 RNAseq -0.6235 0.1373
TCGA ZFYVE19 84936 RNAseq 0.0233 0.6907

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by ZFYVE19 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZFYVE19:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZFYVE19 84936 3 6 21
GSE20123 ZFYVE19 84936 3 6 21
GSE43470 ZFYVE19 84936 4 6 33
GSE46452 ZFYVE19 84936 3 7 49
GSE47630 ZFYVE19 84936 8 11 21
GSE54993 ZFYVE19 84936 4 6 60
GSE54994 ZFYVE19 84936 5 7 41
GSE60625 ZFYVE19 84936 4 0 7
GSE74703 ZFYVE19 84936 4 5 27
GSE74704 ZFYVE19 84936 2 4 14
TCGA ZFYVE19 84936 11 18 67

Total number of gains: 51; Total number of losses: 76; Total Number of normals: 361.  


 

Somatic mutations of ZFYVE19:

 

Generating mutation plots.

 

Highly correlated genes for ZFYVE19:

 

Showing top 20/64 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZFYVE19CUL90.703271303
ZFYVE19NXF30.684193303
ZFYVE19MUC220.657125303
ZFYVE19SPTBN50.649882503
ZFYVE19SLC35C10.634349403
ZFYVE19PRSS270.631068303
ZFYVE19MAFG0.62262403
ZFYVE19PFN40.61991303
ZFYVE19ACCS0.612006303
ZFYVE19ENTPD50.6095503
ZFYVE19TJP20.609357503
ZFYVE19ZNF6920.598442403
ZFYVE19EPN20.589278303
ZFYVE19ESAM0.580803403
ZFYVE19NCCRP10.578895303
ZFYVE19DNAJC170.577844805
ZFYVE19LGALS30.576727403
ZFYVE19ATP6V0A40.572896504
ZFYVE19CIDEA0.57169503
ZFYVE19PTK60.570772503

For details and further investigation, click here