ZMYM6

 

Full name: zinc finger MYM-type containing 6 Alias Symbol: ZNF198L4|MYM|Buster2|ZBED7
Type: protein-coding gene Cytoband: 1p34.3
Entrez ID: 9204 HGNC ID: HGNC:13050 Ensembl Gene: ENSG00000163867 OMIM ID: 613567
Drug and gene relationship at DGIdb

 

Expression of ZMYM6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZMYM6 9204 219924_s_at 0.1984 0.8089
GSE20347 ZMYM6 9204 219924_s_at 0.4164 0.0145
GSE23400 ZMYM6 9204 219924_s_at 0.0862 0.0486
GSE26886 ZMYM6 9204 227594_at -1.3810 0.0001
GSE29001 ZMYM6 9204 219924_s_at 0.4458 0.0039
GSE38129 ZMYM6 9204 219924_s_at 0.3939 0.0933
GSE45670 ZMYM6 9204 219924_s_at -0.1332 0.5255
GSE53622 ZMYM6 9204 126711 -0.3960 0.0000
GSE53624 ZMYM6 9204 126711 -0.3207 0.0000
GSE63941 ZMYM6 9204 219924_s_at -0.3508 0.3642
GSE77861 ZMYM6 9204 219924_s_at 0.0602 0.8098
GSE97050 ZMYM6 9204 A_23_P201845 0.1220 0.6253
SRP007169 ZMYM6 9204 RNAseq -0.4315 0.3103
SRP008496 ZMYM6 9204 RNAseq -0.6782 0.0077
SRP064894 ZMYM6 9204 RNAseq -0.1987 0.2702
SRP133303 ZMYM6 9204 RNAseq -0.0554 0.6633
SRP159526 ZMYM6 9204 RNAseq -0.7714 0.0002
SRP193095 ZMYM6 9204 RNAseq -0.3726 0.0000
SRP219564 ZMYM6 9204 RNAseq -0.6021 0.0635
TCGA ZMYM6 9204 RNAseq -0.1192 0.0214

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by ZMYM6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZMYM6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZMYM6 9204 2 5 23
GSE20123 ZMYM6 9204 2 4 24
GSE43470 ZMYM6 9204 6 2 35
GSE46452 ZMYM6 9204 4 1 54
GSE47630 ZMYM6 9204 8 3 29
GSE54993 ZMYM6 9204 1 1 68
GSE54994 ZMYM6 9204 11 3 39
GSE60625 ZMYM6 9204 0 0 11
GSE74703 ZMYM6 9204 5 1 30
GSE74704 ZMYM6 9204 1 0 19
TCGA ZMYM6 9204 13 18 65

Total number of gains: 53; Total number of losses: 38; Total Number of normals: 397.  


 

Somatic mutations of ZMYM6:

 

Generating mutation plots.

 

Highly correlated genes for ZMYM6:

 

Showing top 20/492 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZMYM6ERLEC10.807079303
ZMYM6SPATS2L0.753512303
ZMYM6CCDC102B0.751029303
ZMYM6TERF2IP0.746898404
ZMYM6PTGFRN0.74355303
ZMYM6CUL4B0.733934303
ZMYM6JKAMP0.72669303
ZMYM6NUP2050.723542303
ZMYM6TTI20.719994303
ZMYM6POLDIP30.711524303
ZMYM6PPP2R2D0.707311303
ZMYM6TTC40.706311303
ZMYM6FAM102B0.704702404
ZMYM6NLGN4X0.704261303
ZMYM6NME10.70307303
ZMYM6WDFY10.700818303
ZMYM6PTPN10.699646404
ZMYM6AK20.698652403
ZMYM6MSL20.698011505
ZMYM6CNBP0.693335404

For details and further investigation, click here