| Full name: zinc finger RANBP2-type containing 1 | Alias Symbol: TRABID | ||
| Type: protein-coding gene | Cytoband: 10q26.13 | ||
| Entrez ID: 54764 | HGNC ID: HGNC:18224 | Ensembl Gene: ENSG00000019995 | OMIM ID: 611749 |
Expression of ZRANB1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZRANB1 | 54764 | 225138_at | -0.5566 | 0.1154 | |
| GSE26886 | ZRANB1 | 54764 | 225138_at | -0.1079 | 0.6950 | |
| GSE45670 | ZRANB1 | 54764 | 225131_at | 0.0014 | 0.9938 | |
| GSE63941 | ZRANB1 | 54764 | 225131_at | -0.5292 | 0.1679 | |
| GSE77861 | ZRANB1 | 54764 | 225138_at | -0.3629 | 0.1569 | |
| GSE97050 | ZRANB1 | 54764 | A_33_P3261565 | -0.4494 | 0.1698 | |
| SRP007169 | ZRANB1 | 54764 | RNAseq | -1.3641 | 0.0013 | |
| SRP008496 | ZRANB1 | 54764 | RNAseq | -1.0980 | 0.0000 | |
| SRP064894 | ZRANB1 | 54764 | RNAseq | -1.2655 | 0.0000 | |
| SRP133303 | ZRANB1 | 54764 | RNAseq | -0.2517 | 0.0230 | |
| SRP159526 | ZRANB1 | 54764 | RNAseq | -0.7081 | 0.0240 | |
| SRP193095 | ZRANB1 | 54764 | RNAseq | -0.3186 | 0.0031 | |
| SRP219564 | ZRANB1 | 54764 | RNAseq | -1.0003 | 0.0003 | |
| TCGA | ZRANB1 | 54764 | RNAseq | -0.1363 | 0.0037 |
Upregulated datasets: 0; Downregulated datasets: 4.
Survival by ZRANB1 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of ZRANB1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZRANB1 | 54764 | 1 | 7 | 22 | |
| GSE20123 | ZRANB1 | 54764 | 1 | 7 | 22 | |
| GSE43470 | ZRANB1 | 54764 | 0 | 10 | 33 | |
| GSE46452 | ZRANB1 | 54764 | 0 | 11 | 48 | |
| GSE47630 | ZRANB1 | 54764 | 2 | 14 | 24 | |
| GSE54993 | ZRANB1 | 54764 | 8 | 1 | 61 | |
| GSE54994 | ZRANB1 | 54764 | 1 | 9 | 43 | |
| GSE60625 | ZRANB1 | 54764 | 0 | 0 | 11 | |
| GSE74703 | ZRANB1 | 54764 | 0 | 6 | 30 | |
| GSE74704 | ZRANB1 | 54764 | 1 | 2 | 17 | |
| TCGA | ZRANB1 | 54764 | 6 | 26 | 64 |
Total number of gains: 20; Total number of losses: 93; Total Number of normals: 375.
Somatic mutations of ZRANB1:
Generating mutation plots.
Highly correlated genes for ZRANB1:
Showing top 20/374 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZRANB1 | DCTN2 | 0.817191 | 3 | 0 | 3 |
| ZRANB1 | MOB4 | 0.802209 | 3 | 0 | 3 |
| ZRANB1 | UBR2 | 0.798837 | 3 | 0 | 3 |
| ZRANB1 | KDM3A | 0.788915 | 3 | 0 | 3 |
| ZRANB1 | NIPSNAP3A | 0.775425 | 3 | 0 | 3 |
| ZRANB1 | GPBP1 | 0.774686 | 3 | 0 | 3 |
| ZRANB1 | RPL37A | 0.773742 | 3 | 0 | 3 |
| ZRANB1 | SAP18 | 0.771282 | 3 | 0 | 3 |
| ZRANB1 | PDCD7 | 0.770875 | 3 | 0 | 3 |
| ZRANB1 | GTF2B | 0.764779 | 3 | 0 | 3 |
| ZRANB1 | ZNF480 | 0.759939 | 3 | 0 | 3 |
| ZRANB1 | SOCS6 | 0.755707 | 3 | 0 | 3 |
| ZRANB1 | SARNP | 0.753776 | 3 | 0 | 3 |
| ZRANB1 | CAPN2 | 0.752624 | 3 | 0 | 3 |
| ZRANB1 | CCNY | 0.74408 | 3 | 0 | 3 |
| ZRANB1 | NEMF | 0.744021 | 3 | 0 | 3 |
| ZRANB1 | PKN2 | 0.739809 | 3 | 0 | 3 |
| ZRANB1 | FAM122A | 0.739486 | 3 | 0 | 3 |
| ZRANB1 | AKIRIN1 | 0.739413 | 3 | 0 | 3 |
| ZRANB1 | AKAP9 | 0.738441 | 4 | 0 | 4 |
For details and further investigation, click here
