ZSCAN10

 

Full name: zinc finger and SCAN domain containing 10 Alias Symbol: 
Type: protein-coding gene Cytoband: 16p13.3
Entrez ID: 84891 HGNC ID: HGNC:12997 Ensembl Gene: ENSG00000130182 OMIM ID: 618365
Drug and gene relationship at DGIdb

 

Expression of ZSCAN10:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZSCAN10 84891 1553875_s_at -0.0236 0.9458
GSE26886 ZSCAN10 84891 1553875_s_at -0.0737 0.6237
GSE45670 ZSCAN10 84891 1553875_s_at 0.0851 0.3184
GSE53622 ZSCAN10 84891 32699 0.2324 0.0841
GSE53624 ZSCAN10 84891 32699 0.2362 0.0054
GSE63941 ZSCAN10 84891 1553875_s_at 0.3302 0.0458
GSE77861 ZSCAN10 84891 1553875_s_at 0.0218 0.8748
TCGA ZSCAN10 84891 RNAseq 2.1748 0.0457

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by ZSCAN10 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZSCAN10:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZSCAN10 84891 5 5 20
GSE20123 ZSCAN10 84891 5 4 21
GSE43470 ZSCAN10 84891 3 8 32
GSE46452 ZSCAN10 84891 38 1 20
GSE47630 ZSCAN10 84891 13 6 21
GSE54993 ZSCAN10 84891 3 5 62
GSE54994 ZSCAN10 84891 5 9 39
GSE60625 ZSCAN10 84891 4 0 7
GSE74703 ZSCAN10 84891 3 6 27
GSE74704 ZSCAN10 84891 3 2 15
TCGA ZSCAN10 84891 19 13 64

Total number of gains: 101; Total number of losses: 59; Total Number of normals: 328.  


 

Somatic mutations of ZSCAN10:

 

Generating mutation plots.

 

Highly correlated genes for ZSCAN10:

 

Showing top 20/152 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZSCAN10AATK0.705129303
ZSCAN10PTGIR0.695366404
ZSCAN10DSCAM0.694601303
ZSCAN10BTNL30.687974303
ZSCAN10IGDCC30.67991404
ZSCAN10MYOG0.679711303
ZSCAN10SLITRK20.678122303
ZSCAN10FKBP80.669006303
ZSCAN10AMHR20.659259303
ZSCAN10GRIK50.656078404
ZSCAN10TNFRSF40.656055303
ZSCAN10MYL100.652746303
ZSCAN10AK80.652083303
ZSCAN10TM4SF50.643344403
ZSCAN10TMEM1450.639962403
ZSCAN10MESP10.639006303
ZSCAN10SSUH20.638988303
ZSCAN10EPX0.638823303
ZSCAN10DPF10.636494303
ZSCAN10GSX10.635924403

For details and further investigation, click here