ABCC4

 

Full name: ATP binding cassette subfamily C member 4 Alias Symbol: MRP4|EST170205|MOAT-B|MOATB
Type: protein-coding gene Cytoband: 13q32.1
Entrez ID: 10257 HGNC ID: HGNC:55 Ensembl Gene: ENSG00000125257 OMIM ID: 605250
Drug and gene relationship at DGIdb

 

Expression of ABCC4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ABCC4 10257 203196_at 0.8362 0.2167
GSE20347 ABCC4 10257 203196_at 0.7203 0.0004
GSE23400 ABCC4 10257 203196_at 0.2824 0.0001
GSE26886 ABCC4 10257 203196_at 1.0857 0.0245
GSE29001 ABCC4 10257 203196_at 0.0080 0.9877
GSE38129 ABCC4 10257 203196_at 0.8602 0.0000
GSE45670 ABCC4 10257 203196_at 0.6698 0.0251
GSE53622 ABCC4 10257 14119 0.8158 0.0000
GSE53624 ABCC4 10257 14119 1.0247 0.0000
GSE63941 ABCC4 10257 203196_at -2.3787 0.0106
GSE77861 ABCC4 10257 203196_at 0.3990 0.0189
GSE97050 ABCC4 10257 A_24_P16913 0.7233 0.0700
SRP007169 ABCC4 10257 RNAseq 1.3071 0.0088
SRP008496 ABCC4 10257 RNAseq 1.9434 0.0000
SRP064894 ABCC4 10257 RNAseq 0.7515 0.0015
SRP133303 ABCC4 10257 RNAseq 0.6440 0.0137
SRP159526 ABCC4 10257 RNAseq 0.6927 0.0788
SRP193095 ABCC4 10257 RNAseq 0.4744 0.0013
SRP219564 ABCC4 10257 RNAseq 0.7482 0.0421
TCGA ABCC4 10257 RNAseq 0.0420 0.6465

Upregulated datasets: 4; Downregulated datasets: 1.  


 

Survival by ABCC4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ABCC4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ABCC4 10257 4 9 17
GSE20123 ABCC4 10257 4 9 17
GSE43470 ABCC4 10257 2 12 29
GSE46452 ABCC4 10257 0 32 27
GSE47630 ABCC4 10257 3 27 10
GSE54993 ABCC4 10257 11 3 56
GSE54994 ABCC4 10257 3 13 37
GSE60625 ABCC4 10257 0 3 8
GSE74703 ABCC4 10257 2 10 24
GSE74704 ABCC4 10257 2 8 10
TCGA ABCC4 10257 12 34 50

Total number of gains: 43; Total number of losses: 160; Total Number of normals: 285.  


 

Somatic mutations of ABCC4:

 

Generating mutation plots.

 

Highly correlated genes for ABCC4:

 

Showing top 20/1360 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ABCC4ACTR30.77292303
ABCC4ETV60.768917303
ABCC4TMTC10.766589404
ABCC4ZNF2600.756945303
ABCC4RPF20.75636303
ABCC4PI150.748943404
ABCC4DHRSX0.736045404
ABCC4RGS180.730922303
ABCC4KDSR0.729796303
ABCC4ALPK20.728826303
ABCC4REST0.726048303
ABCC4SMCR80.713037404
ABCC4TTC39C0.712693404
ABCC4UCK20.711456303
ABCC4TNFAIP10.70636403
ABCC4PGAP10.70302403
ABCC4ALG100.699628504
ABCC4TMEM150C0.695012303
ABCC4OSTC0.69413505
ABCC4HAS30.690809403

For details and further investigation, click here