RGS18

 

Full name: regulator of G protein signaling 18 Alias Symbol: RGS13
Type: protein-coding gene Cytoband: 1q31.2
Entrez ID: 64407 HGNC ID: HGNC:14261 Ensembl Gene: ENSG00000150681 OMIM ID: 607192
Drug and gene relationship at DGIdb

 

Expression of RGS18:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RGS18 64407 223809_at 0.2901 0.8472
GSE26886 RGS18 64407 223809_at -0.2242 0.2980
GSE45670 RGS18 64407 223809_at -0.0476 0.9082
GSE53622 RGS18 64407 47211 -0.2102 0.3448
GSE53624 RGS18 64407 47211 -0.0959 0.6875
GSE63941 RGS18 64407 223809_at -2.6698 0.0000
GSE77861 RGS18 64407 223809_at -0.0145 0.8666
GSE97050 RGS18 64407 A_23_P302550 0.0254 0.9423
SRP007169 RGS18 64407 RNAseq 0.9071 0.2629
SRP133303 RGS18 64407 RNAseq 0.5030 0.1028
SRP219564 RGS18 64407 RNAseq 0.4967 0.4047
TCGA RGS18 64407 RNAseq 0.1688 0.4990

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by RGS18 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RGS18:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RGS18 64407 7 1 22
GSE20123 RGS18 64407 7 1 22
GSE43470 RGS18 64407 5 1 37
GSE46452 RGS18 64407 3 1 55
GSE47630 RGS18 64407 14 0 26
GSE54993 RGS18 64407 0 6 64
GSE54994 RGS18 64407 15 0 38
GSE60625 RGS18 64407 0 0 11
GSE74703 RGS18 64407 5 1 30
GSE74704 RGS18 64407 2 1 17
TCGA RGS18 64407 41 4 51

Total number of gains: 99; Total number of losses: 16; Total Number of normals: 373.  


 

Somatic mutations of RGS18:

 

Generating mutation plots.

 

Highly correlated genes for RGS18:

 

Showing top 20/541 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RGS18C19orf380.84818303
RGS18GIMAP50.834368303
RGS18PRKD30.808131303
RGS18NPAT0.804721303
RGS18CCR20.783009606
RGS18ATP6V0D10.782004303
RGS18PHACTR10.777411404
RGS18IFT460.776028303
RGS18CLEC12A0.77313404
RGS18SAMM500.772823303
RGS18SNX200.767065606
RGS18CST70.764223606
RGS18FLI10.756006706
RGS18CYSLTR20.751431404
RGS18CD860.747463303
RGS18SIGLEC10.745798303
RGS18GIMAP60.745608707
RGS18C16orf540.745142606
RGS18GALM0.744091303
RGS18MTMR60.741756303

For details and further investigation, click here