| Full name: tetratricopeptide repeat domain 39C | Alias Symbol: FLJ33761|HsT2697 | ||
| Type: protein-coding gene | Cytoband: 18q11.2 | ||
| Entrez ID: 125488 | HGNC ID: HGNC:26595 | Ensembl Gene: ENSG00000168234 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TTC39C:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TTC39C | 125488 | 238480_at | 0.1327 | 0.8141 | |
| GSE26886 | TTC39C | 125488 | 238480_at | -0.2626 | 0.2871 | |
| GSE45670 | TTC39C | 125488 | 238480_at | 0.1362 | 0.4329 | |
| GSE53622 | TTC39C | 125488 | 15082 | 0.0478 | 0.5270 | |
| GSE53624 | TTC39C | 125488 | 136338 | 0.6036 | 0.0000 | |
| GSE63941 | TTC39C | 125488 | 238480_at | -1.8577 | 0.0102 | |
| GSE77861 | TTC39C | 125488 | 230747_s_at | 0.3773 | 0.0323 | |
| GSE97050 | TTC39C | 125488 | A_23_P401098 | 0.4478 | 0.4804 | |
| SRP007169 | TTC39C | 125488 | RNAseq | 0.2825 | 0.5740 | |
| SRP008496 | TTC39C | 125488 | RNAseq | 0.6253 | 0.0440 | |
| SRP064894 | TTC39C | 125488 | RNAseq | 0.0965 | 0.6996 | |
| SRP133303 | TTC39C | 125488 | RNAseq | -0.1247 | 0.3681 | |
| SRP159526 | TTC39C | 125488 | RNAseq | 0.6190 | 0.0557 | |
| SRP193095 | TTC39C | 125488 | RNAseq | 0.0557 | 0.6620 | |
| SRP219564 | TTC39C | 125488 | RNAseq | 0.1137 | 0.7205 | |
| TCGA | TTC39C | 125488 | RNAseq | 0.1660 | 0.0134 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by TTC39C expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TTC39C:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TTC39C | 125488 | 2 | 5 | 23 | |
| GSE20123 | TTC39C | 125488 | 1 | 5 | 24 | |
| GSE43470 | TTC39C | 125488 | 2 | 1 | 40 | |
| GSE46452 | TTC39C | 125488 | 3 | 24 | 32 | |
| GSE47630 | TTC39C | 125488 | 7 | 18 | 15 | |
| GSE54993 | TTC39C | 125488 | 7 | 1 | 62 | |
| GSE54994 | TTC39C | 125488 | 3 | 13 | 37 | |
| GSE60625 | TTC39C | 125488 | 0 | 4 | 7 | |
| GSE74703 | TTC39C | 125488 | 2 | 1 | 33 | |
| GSE74704 | TTC39C | 125488 | 1 | 4 | 15 | |
| TCGA | TTC39C | 125488 | 16 | 27 | 53 |
Total number of gains: 44; Total number of losses: 103; Total Number of normals: 341.
Somatic mutations of TTC39C:
Generating mutation plots.
Highly correlated genes for TTC39C:
Showing top 20/319 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TTC39C | LYN | 0.816548 | 3 | 0 | 3 |
| TTC39C | UNKL | 0.795592 | 3 | 0 | 3 |
| TTC39C | GK | 0.786077 | 3 | 0 | 3 |
| TTC39C | NOL10 | 0.771783 | 3 | 0 | 3 |
| TTC39C | PRPSAP2 | 0.770875 | 3 | 0 | 3 |
| TTC39C | GLA | 0.761654 | 3 | 0 | 3 |
| TTC39C | SNX18 | 0.748215 | 3 | 0 | 3 |
| TTC39C | FOXN2 | 0.747189 | 3 | 0 | 3 |
| TTC39C | LIN9 | 0.743441 | 3 | 0 | 3 |
| TTC39C | SMG8 | 0.742552 | 3 | 0 | 3 |
| TTC39C | NAE1 | 0.741714 | 3 | 0 | 3 |
| TTC39C | CHD1L | 0.735952 | 3 | 0 | 3 |
| TTC39C | COMMD2 | 0.733854 | 3 | 0 | 3 |
| TTC39C | MAGT1 | 0.732647 | 4 | 0 | 3 |
| TTC39C | PPA1 | 0.73028 | 3 | 0 | 3 |
| TTC39C | MRPS34 | 0.730196 | 3 | 0 | 3 |
| TTC39C | THOP1 | 0.725184 | 3 | 0 | 3 |
| TTC39C | ASCC3 | 0.723209 | 3 | 0 | 3 |
| TTC39C | SLC44A1 | 0.721623 | 3 | 0 | 3 |
| TTC39C | GPR65 | 0.719297 | 4 | 0 | 3 |
For details and further investigation, click here
