ABCD2

 

Full name: ATP binding cassette subfamily D member 2 Alias Symbol: ALDR|ALDRP
Type: protein-coding gene Cytoband: 12q12
Entrez ID: 225 HGNC ID: HGNC:66 Ensembl Gene: ENSG00000173208 OMIM ID: 601081
Drug and gene relationship at DGIdb

 

Expression of ABCD2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ABCD2 225 207583_at -0.1180 0.5640
GSE20347 ABCD2 225 207583_at 0.0291 0.6441
GSE23400 ABCD2 225 207583_at -0.0127 0.5262
GSE26886 ABCD2 225 207583_at 0.0508 0.5632
GSE29001 ABCD2 225 207583_at -0.1026 0.3758
GSE38129 ABCD2 225 207583_at -0.0248 0.6212
GSE45670 ABCD2 225 207583_at 0.0123 0.8833
GSE53622 ABCD2 225 103138 -1.2165 0.0000
GSE53624 ABCD2 225 103138 -0.4569 0.0036
GSE63941 ABCD2 225 207583_at 0.0645 0.6064
GSE77861 ABCD2 225 207583_at -0.0208 0.7739
GSE97050 ABCD2 225 A_23_P388124 -0.3606 0.2874
SRP133303 ABCD2 225 RNAseq -0.4594 0.2550
SRP193095 ABCD2 225 RNAseq -0.5007 0.1248
TCGA ABCD2 225 RNAseq -0.8633 0.0449

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by ABCD2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ABCD2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ABCD2 225 6 1 23
GSE20123 ABCD2 225 6 1 23
GSE43470 ABCD2 225 5 3 35
GSE46452 ABCD2 225 8 1 50
GSE47630 ABCD2 225 11 2 27
GSE54993 ABCD2 225 1 8 61
GSE54994 ABCD2 225 7 1 45
GSE60625 ABCD2 225 0 0 11
GSE74703 ABCD2 225 4 2 30
GSE74704 ABCD2 225 3 1 16
TCGA ABCD2 225 18 13 65

Total number of gains: 69; Total number of losses: 33; Total Number of normals: 386.  


 

Somatic mutations of ABCD2:

 

Generating mutation plots.

 

Highly correlated genes for ABCD2:

 

Showing top 20/720 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ABCD2GIMAP50.801653303
ABCD2ARHGAP150.784598303
ABCD2AP2A20.774672303
ABCD2RCSD10.774274404
ABCD2C70.757733303
ABCD2P2RY120.748623404
ABCD2ARHGEF60.748086404
ABCD2TNFSF120.74279303
ABCD2PPM1K0.737576303
ABCD2GAB30.734355404
ABCD2ADCY90.725412303
ABCD2DOCK80.724045404
ABCD2TCF210.723653404
ABCD2GNG20.720764303
ABCD2OGN0.717349404
ABCD2EZH10.713807303
ABCD2RERGL0.71318404
ABCD2RHOU0.712219403
ABCD2PODN0.71136505
ABCD2ADH1C0.710071403

For details and further investigation, click here