ABTB2

 

Full name: ankyrin repeat and BTB domain containing 2 Alias Symbol: DKFZP586C1619|BTBD22|ABTB2A
Type: protein-coding gene Cytoband: 11p13
Entrez ID: 25841 HGNC ID: HGNC:23842 Ensembl Gene: ENSG00000166016 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ABTB2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ABTB2 25841 213497_at 0.0042 0.9931
GSE20347 ABTB2 25841 213497_at 0.0168 0.9353
GSE23400 ABTB2 25841 213497_at -0.2439 0.0000
GSE26886 ABTB2 25841 213497_at -0.7584 0.0516
GSE29001 ABTB2 25841 213497_at -0.1165 0.8088
GSE38129 ABTB2 25841 213497_at -0.1607 0.2452
GSE45670 ABTB2 25841 213497_at -0.0240 0.9274
GSE53622 ABTB2 25841 14451 0.1017 0.5500
GSE53624 ABTB2 25841 14451 -0.4092 0.0000
GSE63941 ABTB2 25841 213497_at -0.3084 0.3854
GSE77861 ABTB2 25841 213497_at -0.1569 0.1892
GSE97050 ABTB2 25841 A_23_P356616 0.1913 0.4410
SRP007169 ABTB2 25841 RNAseq -1.8274 0.0202
SRP008496 ABTB2 25841 RNAseq -2.1705 0.0000
SRP064894 ABTB2 25841 RNAseq -1.0871 0.0002
SRP133303 ABTB2 25841 RNAseq 0.2139 0.4659
SRP159526 ABTB2 25841 RNAseq 1.4861 0.0570
SRP193095 ABTB2 25841 RNAseq -0.6303 0.0091
SRP219564 ABTB2 25841 RNAseq -0.4694 0.2556
TCGA ABTB2 25841 RNAseq -0.1256 0.3636

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by ABTB2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ABTB2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ABTB2 25841 1 6 23
GSE20123 ABTB2 25841 1 5 24
GSE43470 ABTB2 25841 3 4 36
GSE46452 ABTB2 25841 7 5 47
GSE47630 ABTB2 25841 3 10 27
GSE54993 ABTB2 25841 3 2 65
GSE54994 ABTB2 25841 3 10 40
GSE60625 ABTB2 25841 0 0 11
GSE74703 ABTB2 25841 3 2 31
GSE74704 ABTB2 25841 0 3 17
TCGA ABTB2 25841 14 24 58

Total number of gains: 38; Total number of losses: 71; Total Number of normals: 379.  


 

Somatic mutations of ABTB2:

 

Generating mutation plots.

 

Highly correlated genes for ABTB2:

 

Showing top 20/24 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ABTB2FAM209B0.641683303
ABTB2SEZ60.610991303
ABTB2FSD10.605387403
ABTB2OBP2A0.6017504
ABTB2SOX100.595127403
ABTB2HSPA1L0.581145404
ABTB2TP53I30.581126403
ABTB2CSN30.577267303
ABTB2HAND2-AS10.572547403
ABTB2SOBP0.545653403
ABTB2ALDH3B10.544444403
ABTB2ATRNL10.54272503
ABTB2GDPD30.540245303
ABTB2EIF4EBP20.522066503
ABTB2RAPGEF30.520112403
ABTB2ACAA10.51402403
ABTB2EHD30.510574403
ABTB2OR10H20.507603403
ABTB2WBP20.506744403
ABTB2TNIP10.505097603

For details and further investigation, click here