ADAMTS17

 

Full name: ADAM metallopeptidase with thrombospondin type 1 motif 17 Alias Symbol: FLJ32769|FLJ16363
Type: protein-coding gene Cytoband: 15q26.3
Entrez ID: 170691 HGNC ID: HGNC:17109 Ensembl Gene: ENSG00000140470 OMIM ID: 607511
Drug and gene relationship at DGIdb

 

Expression of ADAMTS17:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ADAMTS17 170691 1552727_s_at -0.2785 0.8036
GSE26886 ADAMTS17 170691 1552727_s_at -0.8393 0.0180
GSE45670 ADAMTS17 170691 1552727_s_at -0.8280 0.0135
GSE63941 ADAMTS17 170691 1552725_s_at -0.0404 0.8159
GSE77861 ADAMTS17 170691 1552725_s_at -0.2642 0.0561
GSE97050 ADAMTS17 170691 A_33_P3241051 -0.3150 0.3083
SRP007169 ADAMTS17 170691 RNAseq -1.3612 0.0210
SRP064894 ADAMTS17 170691 RNAseq -1.2899 0.0000
SRP133303 ADAMTS17 170691 RNAseq -1.1293 0.0000
SRP159526 ADAMTS17 170691 RNAseq 0.1419 0.7973
SRP193095 ADAMTS17 170691 RNAseq -0.6917 0.0007
SRP219564 ADAMTS17 170691 RNAseq -0.1731 0.7697
TCGA ADAMTS17 170691 RNAseq -0.2663 0.1299

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by ADAMTS17 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of ADAMTS17:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ADAMTS17 170691 7 2 21
GSE20123 ADAMTS17 170691 7 2 21
GSE43470 ADAMTS17 170691 6 5 32
GSE46452 ADAMTS17 170691 3 7 49
GSE47630 ADAMTS17 170691 9 10 21
GSE54993 ADAMTS17 170691 4 7 59
GSE54994 ADAMTS17 170691 8 7 38
GSE60625 ADAMTS17 170691 4 0 7
GSE74703 ADAMTS17 170691 5 4 27
GSE74704 ADAMTS17 170691 3 3 14
TCGA ADAMTS17 170691 18 12 66

Total number of gains: 74; Total number of losses: 59; Total Number of normals: 355.  


 

Somatic mutations of ADAMTS17:

 

Generating mutation plots.

 

Highly correlated genes for ADAMTS17:

 

Showing top 20/132 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ADAMTS17PAX80.722556303
ADAMTS17GALK10.720723303
ADAMTS17APOM0.717884303
ADAMTS17SEMA5A0.711902303
ADAMTS17SIX20.706513303
ADAMTS17FBXO340.700932504
ADAMTS17LIAS0.693785303
ADAMTS17CD90.692992303
ADAMTS17IRGQ0.686716303
ADAMTS17JMJD80.679319403
ADAMTS17PDZD20.679057404
ADAMTS17ZNF780A0.673092303
ADAMTS17NCAN0.672615303
ADAMTS17HECTD10.669106505
ADAMTS17RTKN20.665519404
ADAMTS17ATP6V0A40.663144303
ADAMTS17BRAF0.662578403
ADAMTS17RIPK40.658411404
ADAMTS17MACC10.656436303
ADAMTS17GAB20.656403

For details and further investigation, click here