ADAMTS18

 

Full name: ADAM metallopeptidase with thrombospondin type 1 motif 18 Alias Symbol: 
Type: protein-coding gene Cytoband: 16q23.1
Entrez ID: 170692 HGNC ID: HGNC:17110 Ensembl Gene: ENSG00000140873 OMIM ID: 607512
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ADAMTS18:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ADAMTS18 170692 1553234_at -0.0302 0.9409
GSE26886 ADAMTS18 170692 1553234_at 0.0691 0.6227
GSE45670 ADAMTS18 170692 1553234_at 0.3547 0.0008
GSE53622 ADAMTS18 170692 597 0.8670 0.0258
GSE53624 ADAMTS18 170692 597 1.1487 0.0000
GSE63941 ADAMTS18 170692 1553234_at -0.1081 0.5189
GSE77861 ADAMTS18 170692 1553234_at -0.0635 0.6996
GSE97050 ADAMTS18 170692 A_32_P34844 0.1242 0.7105
SRP133303 ADAMTS18 170692 RNAseq 1.0264 0.0068
TCGA ADAMTS18 170692 RNAseq 1.9644 0.0024

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by ADAMTS18 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ADAMTS18:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ADAMTS18 170692 3 2 25
GSE20123 ADAMTS18 170692 3 2 25
GSE43470 ADAMTS18 170692 2 8 33
GSE46452 ADAMTS18 170692 37 2 20
GSE47630 ADAMTS18 170692 11 8 21
GSE54993 ADAMTS18 170692 2 4 64
GSE54994 ADAMTS18 170692 7 12 34
GSE60625 ADAMTS18 170692 4 0 7
GSE74703 ADAMTS18 170692 2 6 28
GSE74704 ADAMTS18 170692 2 1 17
TCGA ADAMTS18 170692 25 14 57

Total number of gains: 98; Total number of losses: 59; Total Number of normals: 331.  


 

Somatic mutations of ADAMTS18:

 

Generating mutation plots.

 

Highly correlated genes for ADAMTS18:

 

Showing top 20/52 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ADAMTS18CCNH0.728685303
ADAMTS18ANPEP0.708697303
ADAMTS18GUCA2B0.705274303
ADAMTS18EIF3I0.696899303
ADAMTS18CYSLTR20.686839303
ADAMTS18ZNF4600.685961303
ADAMTS18NLRP30.685355303
ADAMTS18FAM222A-AS10.685326303
ADAMTS18WDR40.685273303
ADAMTS18CALY0.676784303
ADAMTS18GRAPL0.664565303
ADAMTS18SRA10.648296303
ADAMTS18MEF2A0.645303303
ADAMTS18PLEKHG20.644423403
ADAMTS18KCNN10.638423303
ADAMTS18SIGLEC60.633794403
ADAMTS18WDR930.62883303
ADAMTS18OR8G10.626932303
ADAMTS18ATP1A40.623389303
ADAMTS18PSMA20.622226303

For details and further investigation, click here