| Full name: apolipoprotein D | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 3q29 | ||
| Entrez ID: 347 | HGNC ID: HGNC:612 | Ensembl Gene: ENSG00000189058 | OMIM ID: 107740 |
| Drug and gene relationship at DGIdb | |||
Expression of APOD:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | APOD | 347 | 201525_at | -2.3009 | 0.1145 | |
| GSE20347 | APOD | 347 | 201525_at | -0.6012 | 0.0020 | |
| GSE23400 | APOD | 347 | 201525_at | -0.8519 | 0.0000 | |
| GSE26886 | APOD | 347 | 201525_at | 0.2740 | 0.2653 | |
| GSE29001 | APOD | 347 | 201525_at | -0.8038 | 0.0476 | |
| GSE38129 | APOD | 347 | 201525_at | -1.1646 | 0.0242 | |
| GSE45670 | APOD | 347 | 201525_at | -2.5507 | 0.0000 | |
| GSE53622 | APOD | 347 | 153660 | -2.6924 | 0.0000 | |
| GSE53624 | APOD | 347 | 153660 | -2.7959 | 0.0000 | |
| GSE63941 | APOD | 347 | 201525_at | 1.4303 | 0.3275 | |
| GSE77861 | APOD | 347 | 201525_at | 0.3146 | 0.3084 | |
| GSE97050 | APOD | 347 | A_23_P136777 | -1.4881 | 0.1552 | |
| SRP064894 | APOD | 347 | RNAseq | -0.0349 | 0.9524 | |
| SRP133303 | APOD | 347 | RNAseq | -1.6222 | 0.0420 | |
| SRP159526 | APOD | 347 | RNAseq | 0.2495 | 0.7148 | |
| SRP219564 | APOD | 347 | RNAseq | -0.3310 | 0.7840 | |
| TCGA | APOD | 347 | RNAseq | -1.0937 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 6.
Survival by APOD expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of APOD:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | APOD | 347 | 22 | 0 | 8 | |
| GSE20123 | APOD | 347 | 22 | 0 | 8 | |
| GSE43470 | APOD | 347 | 21 | 0 | 22 | |
| GSE46452 | APOD | 347 | 19 | 1 | 39 | |
| GSE47630 | APOD | 347 | 27 | 2 | 11 | |
| GSE54993 | APOD | 347 | 1 | 22 | 47 | |
| GSE54994 | APOD | 347 | 41 | 0 | 12 | |
| GSE60625 | APOD | 347 | 0 | 6 | 5 | |
| GSE74703 | APOD | 347 | 19 | 0 | 17 | |
| GSE74704 | APOD | 347 | 14 | 0 | 6 | |
| TCGA | APOD | 347 | 77 | 0 | 19 |
Total number of gains: 263; Total number of losses: 31; Total Number of normals: 194.
Somatic mutations of APOD:
Generating mutation plots.
Highly correlated genes for APOD:
Showing top 20/954 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| APOD | FAM13C | 0.888696 | 3 | 0 | 3 |
| APOD | ANGPTL1 | 0.872755 | 5 | 0 | 5 |
| APOD | MAMDC2 | 0.845121 | 5 | 0 | 5 |
| APOD | CYP4V2 | 0.815774 | 3 | 0 | 3 |
| APOD | FENDRR | 0.812508 | 4 | 0 | 4 |
| APOD | C7 | 0.811099 | 10 | 0 | 10 |
| APOD | AFF3 | 0.809387 | 3 | 0 | 3 |
| APOD | PARD3B | 0.806215 | 4 | 0 | 4 |
| APOD | ADAMTS9-AS2 | 0.802041 | 4 | 0 | 4 |
| APOD | PPP1R12B | 0.798152 | 10 | 0 | 10 |
| APOD | CELF2 | 0.797348 | 8 | 0 | 8 |
| APOD | ABCA8 | 0.790535 | 10 | 0 | 9 |
| APOD | CLEC3B | 0.789172 | 3 | 0 | 3 |
| APOD | PLAC9 | 0.787144 | 5 | 0 | 5 |
| APOD | PLCXD3 | 0.786768 | 4 | 0 | 4 |
| APOD | BOC | 0.781239 | 5 | 0 | 5 |
| APOD | DES | 0.779712 | 9 | 0 | 9 |
| APOD | MYOCD | 0.776598 | 5 | 0 | 5 |
| APOD | TMEM100 | 0.776441 | 8 | 0 | 8 |
| APOD | PLN | 0.773799 | 10 | 0 | 10 |
For details and further investigation, click here
