ATF4

 

Full name: activating transcription factor 4 Alias Symbol: TAXREB67|CREB-2
Type: protein-coding gene Cytoband: 22q13.1
Entrez ID: 468 HGNC ID: HGNC:786 Ensembl Gene: ENSG00000128272 OMIM ID: 604064
Drug and gene relationship at DGIdb
Screen Evidence:

 

ATF4 involved pathways:

KEGG pathway Description View
hsa04010MAPK signaling pathway
hsa04022cGMP-PKG signaling pathway
hsa04151PI3K-Akt signaling pathway
hsa04210Apoptosis
hsa04261Adrenergic signaling in cardiomyocytes
hsa04668TNF signaling pathway
hsa04720Long-term potentiation
hsa04722Neurotrophin signaling pathway
hsa04725Cholinergic synapse
hsa04728Dopaminergic synapse
hsa04911Insulin secretion
hsa04912GnRH signaling pathway
hsa04915Estrogen signaling pathway
hsa04918Thyroid hormone synthesis
hsa04922Glucagon signaling pathway
hsa04925Aldosterone synthesis and secretion
hsa04932Non-alcoholic fatty liver disease (NAFLD)
hsa05030Cocaine addiction
hsa05031Amphetamine addiction
hsa05034Alcoholism
hsa05161Hepatitis B
hsa05166HTLV-I infection
hsa05215Prostate cancer

 

Expression of ATF4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ATF4 468 200779_at -0.1700 0.7017
GSE20347 ATF4 468 200779_at 0.0637 0.6495
GSE23400 ATF4 468 200779_at -0.0684 0.2924
GSE26886 ATF4 468 200779_at 0.2435 0.0839
GSE29001 ATF4 468 200779_at -0.1277 0.7446
GSE38129 ATF4 468 200779_at -0.0305 0.8174
GSE45670 ATF4 468 200779_at -0.0792 0.6184
GSE53622 ATF4 468 103105 -0.2733 0.0001
GSE53624 ATF4 468 103105 -0.1109 0.0463
GSE63941 ATF4 468 200779_at 0.4580 0.4097
GSE77861 ATF4 468 200779_at 0.6100 0.0203
GSE97050 ATF4 468 A_23_P120933 -0.6928 0.0867
SRP007169 ATF4 468 RNAseq -0.8767 0.0197
SRP008496 ATF4 468 RNAseq -0.6855 0.0027
SRP064894 ATF4 468 RNAseq 0.0543 0.7637
SRP133303 ATF4 468 RNAseq 0.0482 0.8122
SRP159526 ATF4 468 RNAseq -0.0475 0.8659
SRP193095 ATF4 468 RNAseq -0.0977 0.4447
SRP219564 ATF4 468 RNAseq -0.3053 0.4297
TCGA ATF4 468 RNAseq -0.1516 0.0001

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ATF4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ATF4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ATF4 468 6 5 19
GSE20123 ATF4 468 6 4 20
GSE43470 ATF4 468 5 6 32
GSE46452 ATF4 468 32 2 25
GSE47630 ATF4 468 9 4 27
GSE54993 ATF4 468 3 6 61
GSE54994 ATF4 468 10 7 36
GSE60625 ATF4 468 5 0 6
GSE74703 ATF4 468 5 4 27
GSE74704 ATF4 468 3 2 15
TCGA ATF4 468 27 15 54

Total number of gains: 111; Total number of losses: 55; Total Number of normals: 322.  


 

Somatic mutations of ATF4:

 

Generating mutation plots.

 

Highly correlated genes for ATF4:

 

Showing top 20/176 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ATF4PSMB70.69267303
ATF4SPTSSA0.682811303
ATF4FRMD30.666475303
ATF4TUBE10.656387303
ATF4ADNP20.656105403
ATF4GADD45A0.653484303
ATF4DDIT30.651057806
ATF4EXTL30.650997303
ATF4MOB3C0.643039303
ATF4COCH0.642867303
ATF4RPS6KC10.641861303
ATF4QSOX20.640845303
ATF4KANSL20.635046303
ATF4COPS20.635011303
ATF4ZNF4170.630676303
ATF4PKN10.628141403
ATF4RBM380.624876403
ATF4INO800.624754303
ATF4ABCG10.623289403
ATF4FAM168B0.621805605

For details and further investigation, click here