Full name: activating transcription factor 4 | Alias Symbol: TAXREB67|CREB-2 | ||
Type: protein-coding gene | Cytoband: 22q13.1 | ||
Entrez ID: 468 | HGNC ID: HGNC:786 | Ensembl Gene: ENSG00000128272 | OMIM ID: 604064 |
Drug and gene relationship at DGIdb | |||
Screen Evidence:
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ATF4 involved pathways:
Expression of ATF4:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | ATF4 | 468 | 200779_at | -0.1700 | 0.7017 | |
GSE20347 | ATF4 | 468 | 200779_at | 0.0637 | 0.6495 | |
GSE23400 | ATF4 | 468 | 200779_at | -0.0684 | 0.2924 | |
GSE26886 | ATF4 | 468 | 200779_at | 0.2435 | 0.0839 | |
GSE29001 | ATF4 | 468 | 200779_at | -0.1277 | 0.7446 | |
GSE38129 | ATF4 | 468 | 200779_at | -0.0305 | 0.8174 | |
GSE45670 | ATF4 | 468 | 200779_at | -0.0792 | 0.6184 | |
GSE53622 | ATF4 | 468 | 103105 | -0.2733 | 0.0001 | |
GSE53624 | ATF4 | 468 | 103105 | -0.1109 | 0.0463 | |
GSE63941 | ATF4 | 468 | 200779_at | 0.4580 | 0.4097 | |
GSE77861 | ATF4 | 468 | 200779_at | 0.6100 | 0.0203 | |
GSE97050 | ATF4 | 468 | A_23_P120933 | -0.6928 | 0.0867 | |
SRP007169 | ATF4 | 468 | RNAseq | -0.8767 | 0.0197 | |
SRP008496 | ATF4 | 468 | RNAseq | -0.6855 | 0.0027 | |
SRP064894 | ATF4 | 468 | RNAseq | 0.0543 | 0.7637 | |
SRP133303 | ATF4 | 468 | RNAseq | 0.0482 | 0.8122 | |
SRP159526 | ATF4 | 468 | RNAseq | -0.0475 | 0.8659 | |
SRP193095 | ATF4 | 468 | RNAseq | -0.0977 | 0.4447 | |
SRP219564 | ATF4 | 468 | RNAseq | -0.3053 | 0.4297 | |
TCGA | ATF4 | 468 | RNAseq | -0.1516 | 0.0001 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by ATF4 expression:
Note: Click image to view full size file.
Copy number change of ATF4:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | ATF4 | 468 | 6 | 5 | 19 | |
GSE20123 | ATF4 | 468 | 6 | 4 | 20 | |
GSE43470 | ATF4 | 468 | 5 | 6 | 32 | |
GSE46452 | ATF4 | 468 | 32 | 2 | 25 | |
GSE47630 | ATF4 | 468 | 9 | 4 | 27 | |
GSE54993 | ATF4 | 468 | 3 | 6 | 61 | |
GSE54994 | ATF4 | 468 | 10 | 7 | 36 | |
GSE60625 | ATF4 | 468 | 5 | 0 | 6 | |
GSE74703 | ATF4 | 468 | 5 | 4 | 27 | |
GSE74704 | ATF4 | 468 | 3 | 2 | 15 | |
TCGA | ATF4 | 468 | 27 | 15 | 54 |
Total number of gains: 111; Total number of losses: 55; Total Number of normals: 322.
Somatic mutations of ATF4:
Generating mutation plots.
Highly correlated genes for ATF4:
Showing top 20/176 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
ATF4 | PSMB7 | 0.69267 | 3 | 0 | 3 |
ATF4 | SPTSSA | 0.682811 | 3 | 0 | 3 |
ATF4 | FRMD3 | 0.666475 | 3 | 0 | 3 |
ATF4 | TUBE1 | 0.656387 | 3 | 0 | 3 |
ATF4 | ADNP2 | 0.656105 | 4 | 0 | 3 |
ATF4 | GADD45A | 0.653484 | 3 | 0 | 3 |
ATF4 | DDIT3 | 0.651057 | 8 | 0 | 6 |
ATF4 | EXTL3 | 0.650997 | 3 | 0 | 3 |
ATF4 | MOB3C | 0.643039 | 3 | 0 | 3 |
ATF4 | COCH | 0.642867 | 3 | 0 | 3 |
ATF4 | RPS6KC1 | 0.641861 | 3 | 0 | 3 |
ATF4 | QSOX2 | 0.640845 | 3 | 0 | 3 |
ATF4 | KANSL2 | 0.635046 | 3 | 0 | 3 |
ATF4 | COPS2 | 0.635011 | 3 | 0 | 3 |
ATF4 | ZNF417 | 0.630676 | 3 | 0 | 3 |
ATF4 | PKN1 | 0.628141 | 4 | 0 | 3 |
ATF4 | RBM38 | 0.624876 | 4 | 0 | 3 |
ATF4 | INO80 | 0.624754 | 3 | 0 | 3 |
ATF4 | ABCG1 | 0.623289 | 4 | 0 | 3 |
ATF4 | FAM168B | 0.621805 | 6 | 0 | 5 |
For details and further investigation, click here