B4GALT4

 

Full name: beta-1,4-galactosyltransferase 4 Alias Symbol: beta4Gal-T4
Type: protein-coding gene Cytoband: 3q13.32
Entrez ID: 8702 HGNC ID: HGNC:927 Ensembl Gene: ENSG00000121578 OMIM ID: 604015
Drug and gene relationship at DGIdb

 

Expression of B4GALT4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 B4GALT4 8702 210540_s_at 0.5582 0.4969
GSE20347 B4GALT4 8702 212876_at 0.5918 0.0025
GSE23400 B4GALT4 8702 212876_at 0.3961 0.0007
GSE26886 B4GALT4 8702 212876_at 0.5502 0.0462
GSE29001 B4GALT4 8702 210540_s_at 0.1510 0.8043
GSE38129 B4GALT4 8702 212876_at 0.5657 0.0002
GSE45670 B4GALT4 8702 210540_s_at 0.5888 0.1417
GSE53622 B4GALT4 8702 89342 0.4641 0.0002
GSE53624 B4GALT4 8702 89342 0.6082 0.0000
GSE63941 B4GALT4 8702 210540_s_at -1.3541 0.0243
GSE77861 B4GALT4 8702 212876_at 0.9399 0.0681
GSE97050 B4GALT4 8702 A_32_P103945 0.5142 0.1506
SRP007169 B4GALT4 8702 RNAseq 1.1957 0.1044
SRP008496 B4GALT4 8702 RNAseq 0.8388 0.0619
SRP064894 B4GALT4 8702 RNAseq 0.6197 0.0299
SRP133303 B4GALT4 8702 RNAseq 0.4895 0.0025
SRP159526 B4GALT4 8702 RNAseq 0.9586 0.0097
SRP193095 B4GALT4 8702 RNAseq 0.2508 0.2844
SRP219564 B4GALT4 8702 RNAseq 0.4589 0.3509
TCGA B4GALT4 8702 RNAseq 0.1352 0.2015

Upregulated datasets: 0; Downregulated datasets: 1.  

 

Survival by B4GALT4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of B4GALT4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 B4GALT4 8702 17 0 13
GSE20123 B4GALT4 8702 17 0 13
GSE43470 B4GALT4 8702 21 1 21
GSE46452 B4GALT4 8702 14 5 40
GSE47630 B4GALT4 8702 16 5 19
GSE54993 B4GALT4 8702 2 6 62
GSE54994 B4GALT4 8702 30 4 19
GSE60625 B4GALT4 8702 0 6 5
GSE74703 B4GALT4 8702 17 1 18
GSE74704 B4GALT4 8702 13 0 7
TCGA B4GALT4 8702 53 7 36

Total number of gains: 200; Total number of losses: 35; Total Number of normals: 253.  

 

Somatic mutations of B4GALT4:

 

Generating mutation plots.

 

Highly correlated genes for B4GALT4:

 

Showing top 20/350 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
B4GALT4SLC30A60.78064303
B4GALT4RCN10.764179303
B4GALT4CCDC1170.748425303
B4GALT4THOC50.737538303
B4GALT4TMEM2030.735983303
B4GALT4UBA60.734499303
B4GALT4BRAP0.709222404
B4GALT4RRAS20.702712403
B4GALT4IFT200.69503404
B4GALT4ADAM90.694842303
B4GALT4MARS20.69074303
B4GALT4HSD17B10.685783404
B4GALT4TAOK10.683576404
B4GALT4LRIF10.681515303
B4GALT4KRTCAP30.678163303
B4GALT4IGFBP50.677246303
B4GALT4SNX180.672969303
B4GALT4FOXE10.67003411010
B4GALT4UQCR100.667119403
B4GALT4CEP2900.665897303

For details and further investigation, click here