| Full name: breast carcinoma amplified sequence 4 | Alias Symbol: FLJ20495|CNOL | ||
| Type: protein-coding gene | Cytoband: 20q13.13 | ||
| Entrez ID: 55653 | HGNC ID: HGNC:14367 | Ensembl Gene: ENSG00000124243 | OMIM ID: 607471 |
| Drug and gene relationship at DGIdb | |||
Expression of BCAS4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | BCAS4 | 55653 | 228787_s_at | 0.2698 | 0.2882 | |
| GSE20347 | BCAS4 | 55653 | 220588_at | 0.3749 | 0.0140 | |
| GSE23400 | BCAS4 | 55653 | 220588_at | 0.0777 | 0.1642 | |
| GSE26886 | BCAS4 | 55653 | 228787_s_at | 0.6201 | 0.0000 | |
| GSE29001 | BCAS4 | 55653 | 220588_at | -0.0100 | 0.9580 | |
| GSE38129 | BCAS4 | 55653 | 220588_at | 0.5457 | 0.0068 | |
| GSE45670 | BCAS4 | 55653 | 228787_s_at | 0.4241 | 0.0020 | |
| GSE53622 | BCAS4 | 55653 | 63789 | 0.5236 | 0.0017 | |
| GSE53624 | BCAS4 | 55653 | 63789 | 0.9065 | 0.0000 | |
| GSE63941 | BCAS4 | 55653 | 228787_s_at | 0.2161 | 0.6473 | |
| GSE77861 | BCAS4 | 55653 | 228787_s_at | 0.0083 | 0.9688 | |
| GSE97050 | BCAS4 | A_21_P0007218 | 0.1126 | 0.7325 | ||
| SRP007169 | BCAS4 | 55653 | RNAseq | 0.6320 | 0.4281 | |
| SRP008496 | BCAS4 | 55653 | RNAseq | 1.6380 | 0.0008 | |
| SRP064894 | BCAS4 | 55653 | RNAseq | 0.9025 | 0.0351 | |
| SRP133303 | BCAS4 | 55653 | RNAseq | 0.8228 | 0.0004 | |
| SRP159526 | BCAS4 | 55653 | RNAseq | 1.2320 | 0.0252 | |
| SRP193095 | BCAS4 | 55653 | RNAseq | 1.2861 | 0.0000 | |
| SRP219564 | BCAS4 | 55653 | RNAseq | 1.5978 | 0.0006 | |
| TCGA | BCAS4 | 55653 | RNAseq | -0.0254 | 0.8045 |
Upregulated datasets: 4; Downregulated datasets: 0.
Survival by BCAS4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of BCAS4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | BCAS4 | 55653 | 16 | 2 | 12 | |
| GSE20123 | BCAS4 | 55653 | 16 | 2 | 12 | |
| GSE43470 | BCAS4 | 55653 | 13 | 0 | 30 | |
| GSE46452 | BCAS4 | 55653 | 29 | 0 | 30 | |
| GSE47630 | BCAS4 | 55653 | 24 | 1 | 15 | |
| GSE54993 | BCAS4 | 55653 | 0 | 17 | 53 | |
| GSE54994 | BCAS4 | 55653 | 27 | 0 | 26 | |
| GSE60625 | BCAS4 | 55653 | 0 | 0 | 11 | |
| GSE74703 | BCAS4 | 55653 | 11 | 0 | 25 | |
| GSE74704 | BCAS4 | 55653 | 12 | 0 | 8 | |
| TCGA | BCAS4 | 55653 | 46 | 3 | 47 |
Total number of gains: 194; Total number of losses: 25; Total Number of normals: 269.
Somatic mutations of BCAS4:
Generating mutation plots.
Highly correlated genes for BCAS4:
Showing top 20/859 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| BCAS4 | PLEKHA4 | 0.805702 | 4 | 0 | 4 |
| BCAS4 | TRIM47 | 0.782305 | 3 | 0 | 3 |
| BCAS4 | MIF | 0.771256 | 3 | 0 | 3 |
| BCAS4 | NFAM1 | 0.767339 | 4 | 0 | 4 |
| BCAS4 | PTOV1 | 0.754345 | 3 | 0 | 3 |
| BCAS4 | DERL3 | 0.753577 | 4 | 0 | 4 |
| BCAS4 | PDGFRB | 0.753214 | 4 | 0 | 3 |
| BCAS4 | CYCS | 0.751894 | 3 | 0 | 3 |
| BCAS4 | CD3EAP | 0.747624 | 3 | 0 | 3 |
| BCAS4 | IDS | 0.734516 | 3 | 0 | 3 |
| BCAS4 | ZNF414 | 0.734101 | 3 | 0 | 3 |
| BCAS4 | MEIS3 | 0.728924 | 4 | 0 | 4 |
| BCAS4 | RGS1 | 0.728631 | 3 | 0 | 3 |
| BCAS4 | INO80E | 0.7268 | 3 | 0 | 3 |
| BCAS4 | LRRC36 | 0.72585 | 3 | 0 | 3 |
| BCAS4 | EPPK1 | 0.722633 | 3 | 0 | 3 |
| BCAS4 | RNF187 | 0.722221 | 3 | 0 | 3 |
| BCAS4 | A4GALT | 0.721976 | 4 | 0 | 4 |
| BCAS4 | HNRNPUL1 | 0.718322 | 3 | 0 | 3 |
| BCAS4 | TSEN34 | 0.711363 | 3 | 0 | 3 |
For details and further investigation, click here
