NFAM1

 

Full name: NFAT activating protein with ITAM motif 1 Alias Symbol: CNAIP
Type: protein-coding gene Cytoband: 22q13.2
Entrez ID: 150372 HGNC ID: HGNC:29872 Ensembl Gene: ENSG00000235568 OMIM ID: 608740
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of NFAM1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NFAM1 150372 230322_at 0.1966 0.5201
GSE26886 NFAM1 150372 230322_at 0.2087 0.0809
GSE45670 NFAM1 150372 230322_at 0.1645 0.0658
GSE63941 NFAM1 150372 230322_at 0.2889 0.0655
GSE77861 NFAM1 150372 230322_at 0.0618 0.7303
GSE97050 NFAM1 150372 A_33_P3292769 -0.0453 0.8608
SRP007169 NFAM1 150372 RNAseq 0.6838 0.4564
SRP064894 NFAM1 150372 RNAseq 1.0002 0.0080
SRP133303 NFAM1 150372 RNAseq 0.2256 0.3012
SRP159526 NFAM1 150372 RNAseq -0.0701 0.9042
SRP193095 NFAM1 150372 RNAseq 0.8421 0.0000
SRP219564 NFAM1 150372 RNAseq 1.8042 0.0015
TCGA NFAM1 150372 RNAseq 0.1082 0.5009

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by NFAM1 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of NFAM1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NFAM1 150372 6 6 18
GSE20123 NFAM1 150372 6 5 19
GSE43470 NFAM1 150372 5 6 32
GSE46452 NFAM1 150372 31 2 26
GSE47630 NFAM1 150372 9 4 27
GSE54993 NFAM1 150372 3 6 61
GSE54994 NFAM1 150372 11 8 34
GSE60625 NFAM1 150372 5 0 6
GSE74703 NFAM1 150372 5 4 27
GSE74704 NFAM1 150372 3 3 14
TCGA NFAM1 150372 28 13 55

Total number of gains: 112; Total number of losses: 57; Total Number of normals: 319.  


 

Somatic mutations of NFAM1:

 

Generating mutation plots.

 

Highly correlated genes for NFAM1:

 

Showing top 20/336 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NFAM1IL3RA0.819588303
NFAM1MAST10.803012303
NFAM1LIN370.78236303
NFAM1EXTL10.781529303
NFAM1BCAS40.767339404
NFAM1FN3K0.762557303
NFAM1RPTOR0.753216303
NFAM1BCORL10.751254303
NFAM1ADAMTS100.743111303
NFAM1KCNC40.739792303
NFAM1CASKIN20.739649303
NFAM1LGI20.737691303
NFAM1MIF0.734502303
NFAM1FNDC80.733916303
NFAM1MRPL380.731589303
NFAM1ZNF5790.731586303
NFAM1MAPRE30.730582404
NFAM1SLC11A10.727858303
NFAM1KLF140.726205303
NFAM1KRT810.725753303

For details and further investigation, click here