BICD2

 

Full name: BICD cargo adaptor 2 Alias Symbol: KIAA0699
Type: protein-coding gene Cytoband: 9q22.31
Entrez ID: 23299 HGNC ID: HGNC:17208 Ensembl Gene: ENSG00000185963 OMIM ID: 609797
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of BICD2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 BICD2 23299 213154_s_at -0.0917 0.8561
GSE20347 BICD2 23299 213154_s_at -0.0795 0.7520
GSE23400 BICD2 23299 213154_s_at 0.3210 0.0108
GSE26886 BICD2 23299 213154_s_at -0.0539 0.8663
GSE29001 BICD2 23299 213154_s_at 0.1753 0.5264
GSE38129 BICD2 23299 213154_s_at 0.1018 0.6718
GSE45670 BICD2 23299 213154_s_at 0.5456 0.0006
GSE53622 BICD2 23299 56599 -0.0670 0.6222
GSE53624 BICD2 23299 56599 0.0466 0.6349
GSE63941 BICD2 23299 213154_s_at -0.2950 0.6317
GSE77861 BICD2 23299 213154_s_at 0.4860 0.1082
GSE97050 BICD2 23299 A_24_P419120 -0.1438 0.5473
SRP007169 BICD2 23299 RNAseq 1.3728 0.0046
SRP008496 BICD2 23299 RNAseq 1.2101 0.0009
SRP064894 BICD2 23299 RNAseq 0.2931 0.2775
SRP133303 BICD2 23299 RNAseq 0.2517 0.3278
SRP159526 BICD2 23299 RNAseq -0.4228 0.2544
SRP193095 BICD2 23299 RNAseq 0.2997 0.2470
SRP219564 BICD2 23299 RNAseq -0.5018 0.2409
TCGA BICD2 23299 RNAseq 0.3752 0.0000

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by BICD2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of BICD2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 BICD2 23299 5 9 16
GSE20123 BICD2 23299 5 9 16
GSE43470 BICD2 23299 6 3 34
GSE46452 BICD2 23299 6 14 39
GSE47630 BICD2 23299 1 17 22
GSE54993 BICD2 23299 4 2 64
GSE54994 BICD2 23299 8 11 34
GSE60625 BICD2 23299 0 0 11
GSE74703 BICD2 23299 5 3 28
GSE74704 BICD2 23299 2 7 11
TCGA BICD2 23299 24 24 48

Total number of gains: 66; Total number of losses: 99; Total Number of normals: 323.  


 

Somatic mutations of BICD2:

 

Generating mutation plots.

 

Highly correlated genes for BICD2:

 

Showing top 20/207 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
BICD2SPIRE10.762351303
BICD2KCTD20.75104303
BICD2DEPDC40.74696303
BICD2PARP20.744679303
BICD2TRAF3IP10.73403303
BICD2MAPK90.731872303
BICD2CLASP10.728379303
BICD2ARL13B0.723246303
BICD2ZBTB110.716974303
BICD2DCTN10.704208303
BICD2ZNF3190.702663303
BICD2EXOSC60.693091303
BICD2TSPAN170.690943303
BICD2RAB11FIP50.689933303
BICD2TAOK10.688976303
BICD2TRIB10.677266303
BICD2MRPL210.673649303
BICD2STUB10.66803303
BICD2SAMD4B0.66533303
BICD2XRCC40.664472303

For details and further investigation, click here