C10orf88

 

Full name: chromosome 10 open reading frame 88 Alias Symbol: FLJ13490|Em:AC073585.5
Type: protein-coding gene Cytoband: 10q26.13
Entrez ID: 80007 HGNC ID: HGNC:25822 Ensembl Gene: ENSG00000119965 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C10orf88:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C10orf88 80007 222852_at 0.1756 0.6496
GSE20347 C10orf88 80007 219240_s_at 0.2620 0.1271
GSE23400 C10orf88 80007 219240_s_at 0.0786 0.0407
GSE26886 C10orf88 80007 222852_at 0.1017 0.7182
GSE29001 C10orf88 80007 219240_s_at 0.1982 0.4040
GSE38129 C10orf88 80007 219240_s_at 0.2085 0.1061
GSE45670 C10orf88 80007 219240_s_at 0.2384 0.0764
GSE53622 C10orf88 80007 128297 0.2023 0.0055
GSE53624 C10orf88 80007 128297 0.2588 0.0295
GSE63941 C10orf88 80007 219240_s_at -0.6009 0.2191
GSE77861 C10orf88 80007 222852_at -0.0944 0.5834
GSE97050 C10orf88 80007 A_33_P3360823 0.1910 0.4373
SRP007169 C10orf88 80007 RNAseq 0.3581 0.4809
SRP008496 C10orf88 80007 RNAseq 0.1703 0.6502
SRP064894 C10orf88 80007 RNAseq 0.0878 0.5198
SRP133303 C10orf88 80007 RNAseq 0.4642 0.0006
SRP159526 C10orf88 80007 RNAseq 0.1553 0.4538
SRP193095 C10orf88 80007 RNAseq 0.1591 0.0426
SRP219564 C10orf88 80007 RNAseq -0.0305 0.9338
TCGA C10orf88 80007 RNAseq 0.0078 0.9047

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by C10orf88 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of C10orf88:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C10orf88 80007 1 6 23
GSE20123 C10orf88 80007 1 6 23
GSE43470 C10orf88 80007 0 9 34
GSE46452 C10orf88 80007 0 11 48
GSE47630 C10orf88 80007 2 14 24
GSE54993 C10orf88 80007 8 1 61
GSE54994 C10orf88 80007 1 9 43
GSE60625 C10orf88 80007 0 0 11
GSE74703 C10orf88 80007 0 6 30
GSE74704 C10orf88 80007 1 2 17
TCGA C10orf88 80007 4 28 64

Total number of gains: 18; Total number of losses: 92; Total Number of normals: 378.  

 

Somatic mutations of C10orf88:

 

Generating mutation plots.

 

Highly correlated genes for C10orf88:

 

Showing top 20/356 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C10orf88TUBGCP40.770112404
C10orf88ANKRD13C0.744643303
C10orf88WDFY30.737078303
C10orf88TMEM2180.733706303
C10orf88CIAO10.731358303
C10orf88LDLRAP10.729323303
C10orf88DTD10.725597303
C10orf88MRPL200.712758303
C10orf88SPIN40.697785303
C10orf88TYW10.696085403
C10orf88EMB0.694564303
C10orf88C12orf730.690947303
C10orf88TMEM110.68194403
C10orf88RABL30.681044303
C10orf88KDSR0.680261303
C10orf88TNRC6A0.68004303
C10orf88ARID20.679725303
C10orf88UBE3C0.678873404
C10orf88AQR0.677035303
C10orf88DVL30.676968303

For details and further investigation, click here