| Full name: chromosome 12 open reading frame 54 | Alias Symbol: MGC35033 | ||
| Type: protein-coding gene | Cytoband: 12q13.11 | ||
| Entrez ID: 121273 | HGNC ID: HGNC:28553 | Ensembl Gene: ENSG00000177627 | OMIM ID: |
Expression of C12orf54:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C12orf54 | 121273 | 240353_s_at | 0.9805 | 0.4770 | |
| GSE26886 | C12orf54 | 121273 | 240353_s_at | 0.0587 | 0.9105 | |
| GSE45670 | C12orf54 | 121273 | 240353_s_at | 1.0400 | 0.0048 | |
| GSE53622 | C12orf54 | 121273 | 52901 | 0.4545 | 0.0587 | |
| GSE53624 | C12orf54 | 121273 | 52901 | 0.3180 | 0.0536 | |
| GSE63941 | C12orf54 | 121273 | 237701_at | 0.3794 | 0.1728 | |
| GSE77861 | C12orf54 | 121273 | 237701_at | -0.1348 | 0.4807 | |
| GSE97050 | C12orf54 | 121273 | A_23_P405878 | 0.4738 | 0.1818 | |
| SRP133303 | C12orf54 | 121273 | RNAseq | 1.6838 | 0.0062 | |
| SRP159526 | C12orf54 | 121273 | RNAseq | -0.5037 | 0.3368 | |
| SRP219564 | C12orf54 | 121273 | RNAseq | -0.1111 | 0.8887 | |
| TCGA | C12orf54 | 121273 | RNAseq | 2.9303 | 0.0000 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by C12orf54 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C12orf54:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C12orf54 | 121273 | 6 | 1 | 23 | |
| GSE20123 | C12orf54 | 121273 | 6 | 1 | 23 | |
| GSE43470 | C12orf54 | 121273 | 3 | 1 | 39 | |
| GSE46452 | C12orf54 | 121273 | 8 | 1 | 50 | |
| GSE47630 | C12orf54 | 121273 | 11 | 2 | 27 | |
| GSE54993 | C12orf54 | 121273 | 0 | 5 | 65 | |
| GSE54994 | C12orf54 | 121273 | 6 | 1 | 46 | |
| GSE60625 | C12orf54 | 121273 | 0 | 0 | 11 | |
| GSE74703 | C12orf54 | 121273 | 3 | 1 | 32 | |
| GSE74704 | C12orf54 | 121273 | 4 | 1 | 15 | |
| TCGA | C12orf54 | 121273 | 15 | 12 | 69 |
Total number of gains: 62; Total number of losses: 26; Total Number of normals: 400.
Somatic mutations of C12orf54:
Generating mutation plots.
Highly correlated genes for C12orf54:
Showing top 20/30 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C12orf54 | FAM24B | 0.70089 | 3 | 0 | 3 |
| C12orf54 | CBX8 | 0.695149 | 3 | 0 | 3 |
| C12orf54 | SCGB1A1 | 0.656007 | 4 | 0 | 3 |
| C12orf54 | ATG4D | 0.648748 | 4 | 0 | 3 |
| C12orf54 | EDARADD | 0.643197 | 4 | 0 | 3 |
| C12orf54 | SUN5 | 0.640412 | 3 | 0 | 3 |
| C12orf54 | CYP4Z1 | 0.634592 | 4 | 0 | 3 |
| C12orf54 | HRK | 0.630132 | 5 | 0 | 4 |
| C12orf54 | PMCH | 0.61839 | 3 | 0 | 3 |
| C12orf54 | PTPRH | 0.600982 | 4 | 0 | 3 |
| C12orf54 | ERMP1 | 0.600687 | 3 | 0 | 3 |
| C12orf54 | ABRACL | 0.596517 | 3 | 0 | 3 |
| C12orf54 | PPP2R5D | 0.577478 | 3 | 0 | 3 |
| C12orf54 | STEAP3 | 0.570893 | 5 | 0 | 3 |
| C12orf54 | LRFN4 | 0.570844 | 4 | 0 | 3 |
| C12orf54 | GABRR3 | 0.565004 | 4 | 0 | 3 |
| C12orf54 | PTGES | 0.554672 | 4 | 0 | 3 |
| C12orf54 | RHBDL1 | 0.554255 | 4 | 0 | 3 |
| C12orf54 | PRICKLE3 | 0.551355 | 4 | 0 | 3 |
| C12orf54 | MMP13 | 0.54644 | 3 | 0 | 3 |
For details and further investigation, click here
