| Full name: chromosome 17 open reading frame 97 | Alias Symbol: LOC400566|LIAT1 | ||
| Type: protein-coding gene | Cytoband: 17p13.3 | ||
| Entrez ID: 400566 | HGNC ID: HGNC:33800 | Ensembl Gene: ENSG00000187624 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C17orf97:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C17orf97 | 400566 | 229238_at | -0.4196 | 0.3701 | |
| GSE26886 | C17orf97 | 400566 | 229238_at | 0.6034 | 0.0255 | |
| GSE45670 | C17orf97 | 400566 | 229238_at | 0.1607 | 0.6908 | |
| GSE53622 | C17orf97 | 400566 | 45339 | -0.2522 | 0.3065 | |
| GSE53624 | C17orf97 | 400566 | 135897 | -0.2490 | 0.2601 | |
| GSE63941 | C17orf97 | 400566 | 229238_at | -0.0124 | 0.9906 | |
| GSE77861 | C17orf97 | 400566 | 229238_at | 0.0451 | 0.8955 | |
| GSE97050 | C17orf97 | 400566 | A_33_P3356320 | 0.0247 | 0.9297 | |
| SRP133303 | C17orf97 | 400566 | RNAseq | -0.6106 | 0.1459 | |
| SRP159526 | C17orf97 | 400566 | RNAseq | 0.0667 | 0.8951 | |
| SRP219564 | C17orf97 | 400566 | RNAseq | -0.2397 | 0.7382 | |
| TCGA | C17orf97 | 400566 | RNAseq | -0.1817 | 0.3372 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C17orf97 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C17orf97:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C17orf97 | 400566 | 5 | 2 | 23 | |
| GSE20123 | C17orf97 | 400566 | 5 | 3 | 22 | |
| GSE43470 | C17orf97 | 400566 | 1 | 7 | 35 | |
| GSE46452 | C17orf97 | 400566 | 34 | 1 | 24 | |
| GSE47630 | C17orf97 | 400566 | 8 | 1 | 31 | |
| GSE54993 | C17orf97 | 400566 | 8 | 3 | 59 | |
| GSE54994 | C17orf97 | 400566 | 7 | 9 | 37 | |
| GSE60625 | C17orf97 | 400566 | 4 | 0 | 7 | |
| GSE74703 | C17orf97 | 400566 | 1 | 4 | 31 | |
| GSE74704 | C17orf97 | 400566 | 3 | 1 | 16 | |
| TCGA | C17orf97 | 400566 | 19 | 21 | 56 |
Total number of gains: 95; Total number of losses: 52; Total Number of normals: 341.
Somatic mutations of C17orf97:
Generating mutation plots.
Highly correlated genes for C17orf97:
Showing top 20/87 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C17orf97 | PPP1R11 | 0.731825 | 3 | 0 | 3 |
| C17orf97 | PMF1 | 0.715959 | 3 | 0 | 3 |
| C17orf97 | PGLS | 0.691145 | 3 | 0 | 3 |
| C17orf97 | SPSB1 | 0.676797 | 3 | 0 | 3 |
| C17orf97 | ZFAND3 | 0.674256 | 3 | 0 | 3 |
| C17orf97 | GPKOW | 0.672702 | 3 | 0 | 3 |
| C17orf97 | HECTD3 | 0.671542 | 3 | 0 | 3 |
| C17orf97 | KBTBD4 | 0.668892 | 3 | 0 | 3 |
| C17orf97 | ABHD14B | 0.668623 | 3 | 0 | 3 |
| C17orf97 | TMEM150A | 0.667179 | 3 | 0 | 3 |
| C17orf97 | FBXW4 | 0.662258 | 3 | 0 | 3 |
| C17orf97 | KAT5 | 0.662087 | 3 | 0 | 3 |
| C17orf97 | COG1 | 0.661358 | 4 | 0 | 3 |
| C17orf97 | EIF3G | 0.658506 | 3 | 0 | 3 |
| C17orf97 | KLHL9 | 0.656851 | 3 | 0 | 3 |
| C17orf97 | ARFRP1 | 0.653781 | 3 | 0 | 3 |
| C17orf97 | MRI1 | 0.6497 | 3 | 0 | 3 |
| C17orf97 | TRMT11 | 0.647301 | 3 | 0 | 3 |
| C17orf97 | TMEM205 | 0.639532 | 3 | 0 | 3 |
| C17orf97 | LRRC47 | 0.637329 | 4 | 0 | 4 |
For details and further investigation, click here
