CCDC112

 

Full name: coiled-coil domain containing 112 Alias Symbol: MGC39633
Type: protein-coding gene Cytoband: 5q22.3
Entrez ID: 153733 HGNC ID: HGNC:28599 Ensembl Gene: ENSG00000164221 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CCDC112:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC112 153733 235208_at -0.0760 0.8648
GSE26886 CCDC112 153733 235208_at 0.1443 0.3842
GSE45670 CCDC112 153733 235208_at -0.0374 0.8444
GSE53622 CCDC112 153733 34281 -0.3115 0.0082
GSE53624 CCDC112 153733 34281 0.0571 0.5348
GSE63941 CCDC112 153733 235208_at -0.1723 0.7714
GSE77861 CCDC112 153733 235208_at -0.1263 0.4784
GSE97050 CCDC112 153733 A_33_P3828101 -0.7169 0.1189
SRP007169 CCDC112 153733 RNAseq 0.4633 0.5171
SRP064894 CCDC112 153733 RNAseq -0.1048 0.5623
SRP133303 CCDC112 153733 RNAseq 0.4130 0.0290
SRP159526 CCDC112 153733 RNAseq -0.2168 0.5099
SRP193095 CCDC112 153733 RNAseq -0.3999 0.0029
SRP219564 CCDC112 153733 RNAseq -0.1376 0.7017
TCGA CCDC112 153733 RNAseq -0.1590 0.0789

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CCDC112 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCDC112:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC112 153733 1 12 17
GSE20123 CCDC112 153733 1 12 17
GSE43470 CCDC112 153733 3 8 32
GSE46452 CCDC112 153733 0 28 31
GSE47630 CCDC112 153733 0 21 19
GSE54993 CCDC112 153733 9 1 60
GSE54994 CCDC112 153733 1 15 37
GSE60625 CCDC112 153733 0 0 11
GSE74703 CCDC112 153733 2 6 28
GSE74704 CCDC112 153733 1 6 13
TCGA CCDC112 153733 2 41 53

Total number of gains: 20; Total number of losses: 150; Total Number of normals: 318.  


 

Somatic mutations of CCDC112:

 

Generating mutation plots.

 

Highly correlated genes for CCDC112:

 

Showing top 20/133 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC112TRNT10.755692303
CCDC112C1orf210.720495303
CCDC112ZNF1210.718497303
CCDC112ZBTB8A0.710882404
CCDC112ESF10.71025303
CCDC112UBR30.708698403
CCDC112ATRX0.695042303
CCDC112SREK1IP10.693641303
CCDC112CEBPZ0.691977303
CCDC112CPEB20.690621303
CCDC112THOC10.68427303
CCDC112QKI0.682433303
CCDC112EIF2S10.678445303
CCDC112APC0.677956404
CCDC112SNTA10.67774303
CCDC112DYNC1I20.674371403
CCDC112CWC220.673423403
CCDC112STYX0.671531403
CCDC112PDHB0.669013303
CCDC112ZC3H150.66473403

For details and further investigation, click here