| Full name: cadherin 20 | Alias Symbol: CDH7L3|Cdh7 | ||
| Type: protein-coding gene | Cytoband: 18q21.33 | ||
| Entrez ID: 28316 | HGNC ID: HGNC:1760 | Ensembl Gene: ENSG00000101542 | OMIM ID: 605807 |
| Drug and gene relationship at DGIdb | |||
Expression of CDH20:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CDH20 | 28316 | 210913_at | -0.0948 | 0.7286 | |
| GSE20347 | CDH20 | 28316 | 210913_at | 0.0137 | 0.8295 | |
| GSE23400 | CDH20 | 28316 | 210913_at | -0.0893 | 0.0001 | |
| GSE26886 | CDH20 | 28316 | 210913_at | -0.1267 | 0.1458 | |
| GSE29001 | CDH20 | 28316 | 210913_at | -0.1691 | 0.3049 | |
| GSE38129 | CDH20 | 28316 | 210913_at | -0.0086 | 0.8934 | |
| GSE45670 | CDH20 | 28316 | 210913_at | 0.0472 | 0.6693 | |
| GSE53622 | CDH20 | 28316 | 36630 | -1.6772 | 0.0000 | |
| GSE53624 | CDH20 | 28316 | 36630 | -0.6156 | 0.0000 | |
| GSE63941 | CDH20 | 28316 | 210913_at | 0.1443 | 0.2949 | |
| GSE77861 | CDH20 | 28316 | 210913_at | -0.0727 | 0.5052 | |
| SRP133303 | CDH20 | 28316 | RNAseq | -1.7897 | 0.0000 | |
| SRP159526 | CDH20 | 28316 | RNAseq | -2.2587 | 0.0003 | |
| TCGA | CDH20 | 28316 | RNAseq | -0.8840 | 0.1278 |
Upregulated datasets: 0; Downregulated datasets: 3.
Survival by CDH20 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CDH20:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CDH20 | 28316 | 1 | 9 | 20 | |
| GSE20123 | CDH20 | 28316 | 1 | 9 | 20 | |
| GSE43470 | CDH20 | 28316 | 0 | 5 | 38 | |
| GSE46452 | CDH20 | 28316 | 1 | 26 | 32 | |
| GSE47630 | CDH20 | 28316 | 5 | 21 | 14 | |
| GSE54993 | CDH20 | 28316 | 10 | 0 | 60 | |
| GSE54994 | CDH20 | 28316 | 1 | 18 | 34 | |
| GSE60625 | CDH20 | 28316 | 0 | 4 | 7 | |
| GSE74703 | CDH20 | 28316 | 0 | 5 | 31 | |
| GSE74704 | CDH20 | 28316 | 1 | 6 | 13 | |
| TCGA | CDH20 | 28316 | 10 | 45 | 41 |
Total number of gains: 30; Total number of losses: 148; Total Number of normals: 310.
Somatic mutations of CDH20:
Generating mutation plots.
Highly correlated genes for CDH20:
Showing top 20/279 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CDH20 | FGF23 | 0.709673 | 3 | 0 | 3 |
| CDH20 | EFR3B | 0.669469 | 3 | 0 | 3 |
| CDH20 | NTNG1 | 0.659624 | 3 | 0 | 3 |
| CDH20 | AP4S1 | 0.659616 | 3 | 0 | 3 |
| CDH20 | CST8 | 0.659073 | 4 | 0 | 3 |
| CDH20 | GYPA | 0.653372 | 3 | 0 | 3 |
| CDH20 | CEACAM8 | 0.65206 | 4 | 0 | 4 |
| CDH20 | KRT76 | 0.641217 | 4 | 0 | 4 |
| CDH20 | BPIFA1 | 0.639931 | 3 | 0 | 3 |
| CDH20 | MED31 | 0.634745 | 3 | 0 | 3 |
| CDH20 | FOLH1 | 0.633168 | 3 | 0 | 3 |
| CDH20 | P2RX3 | 0.632056 | 4 | 0 | 3 |
| CDH20 | SNX24 | 0.631752 | 4 | 0 | 3 |
| CDH20 | CLEC1B | 0.631224 | 3 | 0 | 3 |
| CDH20 | PDE2A | 0.630267 | 3 | 0 | 3 |
| CDH20 | CCDC7 | 0.62959 | 4 | 0 | 3 |
| CDH20 | GK2 | 0.629286 | 4 | 0 | 3 |
| CDH20 | OR1D2 | 0.625373 | 3 | 0 | 3 |
| CDH20 | CALCA | 0.625363 | 4 | 0 | 4 |
| CDH20 | ZDHHC21 | 0.624036 | 3 | 0 | 3 |
For details and further investigation, click here
