CHCHD2

 

Full name: coiled-coil-helix-coiled-coil-helix domain containing 2 Alias Symbol: MIX17B|MNRR1
Type: protein-coding gene Cytoband: 7p11.2
Entrez ID: 51142 HGNC ID: HGNC:21645 Ensembl Gene: ENSG00000106153 OMIM ID: 616244
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of CHCHD2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CHCHD2 51142 217720_at 0.3988 0.3362
GSE20347 CHCHD2 51142 217720_at 0.5965 0.0183
GSE23400 CHCHD2 51142 217720_at 0.4420 0.0000
GSE26886 CHCHD2 51142 217720_at 0.8641 0.0000
GSE29001 CHCHD2 51142 217720_at 0.3599 0.3669
GSE38129 CHCHD2 51142 217720_at 0.6503 0.0001
GSE45670 CHCHD2 51142 217720_at 0.2680 0.0154
GSE63941 CHCHD2 51142 217720_at 1.1148 0.0018
GSE77861 CHCHD2 51142 217720_at 0.2919 0.1843
GSE97050 CHCHD2 51142 A_24_P400376 0.1330 0.6190
SRP007169 CHCHD2 51142 RNAseq -0.1239 0.7334
SRP008496 CHCHD2 51142 RNAseq 0.3544 0.3484
SRP064894 CHCHD2 51142 RNAseq 0.4680 0.0826
SRP133303 CHCHD2 51142 RNAseq 0.5162 0.0001
SRP159526 CHCHD2 51142 RNAseq 0.5885 0.0532
SRP193095 CHCHD2 51142 RNAseq 0.0071 0.9665
SRP219564 CHCHD2 51142 RNAseq 0.3234 0.1702
TCGA CHCHD2 51142 RNAseq 0.0774 0.1871

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by CHCHD2 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of CHCHD2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CHCHD2 51142 13 0 17
GSE20123 CHCHD2 51142 11 0 19
GSE43470 CHCHD2 51142 5 0 38
GSE46452 CHCHD2 51142 13 0 46
GSE47630 CHCHD2 51142 10 1 29
GSE54993 CHCHD2 51142 0 8 62
GSE54994 CHCHD2 51142 16 2 35
GSE60625 CHCHD2 51142 0 0 11
GSE74703 CHCHD2 51142 5 0 31
GSE74704 CHCHD2 51142 6 0 14
TCGA CHCHD2 51142 53 5 38

Total number of gains: 132; Total number of losses: 16; Total Number of normals: 340.  


 

Somatic mutations of CHCHD2:

 

Generating mutation plots.

 

Highly correlated genes for CHCHD2:

 

Showing top 20/1560 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CHCHD2TCEANC20.836962303
CHCHD2CIB10.816596303
CHCHD2KRTCAP20.798155404
CHCHD2RPS19BP10.788427404
CHCHD2DNMBP0.768263303
CHCHD2C12orf650.761289303
CHCHD2MRPL550.753765303
CHCHD2NTMT10.751542404
CHCHD2COQ40.751542303
CHCHD2CCT40.750662909
CHCHD2CCDC1240.748716404
CHCHD2PPP1R16A0.748495303
CHCHD2GHDC0.74511303
CHCHD2WDR540.744063505
CHCHD2GTPBP30.74021505
CHCHD2CCM20.739648404
CHCHD2MRPL300.739416303
CHCHD2MRPS170.7363391009
CHCHD2ZFP900.735671303
CHCHD2PSMA20.729463909

For details and further investigation, click here