CLASP2

 

Full name: cytoplasmic linker associated protein 2 Alias Symbol: KIAA0627
Type: protein-coding gene Cytoband: 3p22.3
Entrez ID: 23122 HGNC ID: HGNC:17078 Ensembl Gene: ENSG00000163539 OMIM ID: 605853
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CLASP2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLASP2 23122 212306_at 0.0169 0.9813
GSE20347 CLASP2 23122 212306_at -0.2926 0.0623
GSE23400 CLASP2 23122 212306_at 0.0436 0.5113
GSE26886 CLASP2 23122 212306_at -0.2227 0.3354
GSE29001 CLASP2 23122 212309_at -0.2272 0.2289
GSE38129 CLASP2 23122 212306_at -0.3095 0.0108
GSE45670 CLASP2 23122 212306_at -0.0385 0.8076
GSE53622 CLASP2 23122 77511 -0.3420 0.0000
GSE53624 CLASP2 23122 19249 -0.4176 0.0000
GSE63941 CLASP2 23122 212306_at 0.1023 0.8490
GSE77861 CLASP2 23122 212306_at -0.1333 0.5800
GSE97050 CLASP2 23122 A_23_P44295 -0.5418 0.1889
SRP007169 CLASP2 23122 RNAseq 0.0777 0.7993
SRP008496 CLASP2 23122 RNAseq 0.1216 0.5026
SRP064894 CLASP2 23122 RNAseq -0.3666 0.0773
SRP133303 CLASP2 23122 RNAseq -0.3875 0.0013
SRP159526 CLASP2 23122 RNAseq -0.5840 0.0032
SRP193095 CLASP2 23122 RNAseq -0.3647 0.0000
SRP219564 CLASP2 23122 RNAseq -0.3625 0.2117
TCGA CLASP2 23122 RNAseq -0.1704 0.0005

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CLASP2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CLASP2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLASP2 23122 0 18 12
GSE20123 CLASP2 23122 0 18 12
GSE43470 CLASP2 23122 1 19 23
GSE46452 CLASP2 23122 2 17 40
GSE47630 CLASP2 23122 1 25 14
GSE54993 CLASP2 23122 6 3 61
GSE54994 CLASP2 23122 1 32 20
GSE60625 CLASP2 23122 5 0 6
GSE74703 CLASP2 23122 1 16 19
GSE74704 CLASP2 23122 0 12 8
TCGA CLASP2 23122 1 69 26

Total number of gains: 18; Total number of losses: 229; Total Number of normals: 241.  


 

Somatic mutations of CLASP2:

 

Generating mutation plots.

 

Highly correlated genes for CLASP2:

 

Showing top 20/248 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLASP2CCDC510.777331303
CLASP2TUBB2A0.725287303
CLASP2SRFBP10.718624303
CLASP2PYGM0.695482303
CLASP2SLMAP0.692739404
CLASP2RAB9B0.688491303
CLASP2FNDC50.683675303
CLASP2RCAN20.683562303
CLASP2TNRC6A0.682232303
CLASP2ZCCHC100.680683303
CLASP2CASQ20.679116303
CLASP2ANGPTL10.678929303
CLASP2AGPAT50.675052303
CLASP2ANO50.674491303
CLASP2SUPT7L0.672351303
CLASP2NEGR10.670999303
CLASP2ATG2B0.670474404
CLASP2SEC23A0.669725404
CLASP2ROCK20.660978403
CLASP2USP240.652511303

For details and further investigation, click here