SLMAP

 

Full name: sarcolemma associated protein Alias Symbol: SLAP|KIAA1601
Type: protein-coding gene Cytoband: 3p14.3
Entrez ID: 7871 HGNC ID: HGNC:16643 Ensembl Gene: ENSG00000163681 OMIM ID: 602701
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of SLMAP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLMAP 7871 225243_s_at -1.3211 0.0695
GSE26886 SLMAP 7871 225243_s_at -1.0814 0.0000
GSE45670 SLMAP 7871 225243_s_at -1.2089 0.0000
GSE53622 SLMAP 7871 92483 -1.8104 0.0000
GSE53624 SLMAP 7871 92483 -1.5268 0.0000
GSE63941 SLMAP 7871 225243_s_at -0.8373 0.0884
GSE77861 SLMAP 7871 225243_s_at -0.4396 0.0299
GSE97050 SLMAP 7871 A_24_P942773 -2.0002 0.0643
SRP007169 SLMAP 7871 RNAseq -0.6809 0.0638
SRP008496 SLMAP 7871 RNAseq -0.2508 0.2924
SRP064894 SLMAP 7871 RNAseq -1.2197 0.0000
SRP133303 SLMAP 7871 RNAseq -0.9157 0.0000
SRP159526 SLMAP 7871 RNAseq -1.2191 0.0021
SRP193095 SLMAP 7871 RNAseq -0.6144 0.0000
SRP219564 SLMAP 7871 RNAseq -1.5769 0.0429
TCGA SLMAP 7871 RNAseq -0.3509 0.0000

Upregulated datasets: 0; Downregulated datasets: 7.  


 

Survival by SLMAP expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLMAP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLMAP 7871 0 17 13
GSE20123 SLMAP 7871 0 18 12
GSE43470 SLMAP 7871 0 17 26
GSE46452 SLMAP 7871 2 17 40
GSE47630 SLMAP 7871 1 24 15
GSE54993 SLMAP 7871 6 2 62
GSE54994 SLMAP 7871 0 32 21
GSE60625 SLMAP 7871 5 0 6
GSE74703 SLMAP 7871 0 14 22
GSE74704 SLMAP 7871 0 11 9
TCGA SLMAP 7871 0 79 17

Total number of gains: 14; Total number of losses: 231; Total Number of normals: 243.  


 

Somatic mutations of SLMAP:

 

Generating mutation plots.

 

Highly correlated genes for SLMAP:

 

Showing top 20/1602 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLMAPRASSF30.861057505
SLMAPHPSE20.850914505
SLMAPSLC2A40.845073303
SLMAPPCP40.843329505
SLMAPWBP40.836127303
SLMAPCLEC3B0.835973303
SLMAPSLITRK30.834594505
SLMAPRAP1A0.833081707
SLMAPPYGM0.831995505
SLMAPSLC8A10.827038303
SLMAPC1QTNF70.820403505
SLMAPCKMT20.815677505
SLMAPXKR40.815646505
SLMAPCHRDL10.812004404
SLMAPBCHE0.811252505
SLMAPMYOC0.802679505
SLMAPOGN0.802128505
SLMAPPDK40.798839404
SLMAPCYP21A20.798217303
SLMAPPPP1R12A0.797943707

For details and further investigation, click here