CLEC2B

 

Full name: C-type lectin domain family 2 member B Alias Symbol: AICL|HP10085
Type: protein-coding gene Cytoband: 12p13.31
Entrez ID: 9976 HGNC ID: HGNC:2053 Ensembl Gene: ENSG00000110852 OMIM ID: 603242
Drug and gene relationship at DGIdb

 

Expression of CLEC2B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLEC2B 9976 209732_at 0.3070 0.6488
GSE20347 CLEC2B 9976 209732_at 0.3427 0.3577
GSE23400 CLEC2B 9976 209732_at 0.3005 0.0664
GSE26886 CLEC2B 9976 209732_at -0.1622 0.8012
GSE29001 CLEC2B 9976 209732_at 0.5398 0.4759
GSE38129 CLEC2B 9976 209732_at 0.3091 0.2900
GSE45670 CLEC2B 9976 209732_at 0.6645 0.1096
GSE63941 CLEC2B 9976 209732_at -4.0495 0.0619
GSE77861 CLEC2B 9976 209732_at 0.0092 0.9917
GSE97050 CLEC2B 9976 A_33_P3332970 0.0322 0.8949
SRP007169 CLEC2B 9976 RNAseq -0.6889 0.1545
SRP008496 CLEC2B 9976 RNAseq -0.8741 0.0238
SRP064894 CLEC2B 9976 RNAseq 0.5308 0.0262
SRP133303 CLEC2B 9976 RNAseq 0.6014 0.0947
SRP159526 CLEC2B 9976 RNAseq -0.8600 0.0838
SRP193095 CLEC2B 9976 RNAseq 0.3512 0.2561
SRP219564 CLEC2B 9976 RNAseq 0.8122 0.0909
TCGA CLEC2B 9976 RNAseq 0.6456 0.0000

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CLEC2B expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of CLEC2B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLEC2B 9976 6 3 21
GSE20123 CLEC2B 9976 6 3 21
GSE43470 CLEC2B 9976 8 3 32
GSE46452 CLEC2B 9976 10 1 48
GSE47630 CLEC2B 9976 14 2 24
GSE54993 CLEC2B 9976 1 10 59
GSE54994 CLEC2B 9976 9 2 42
GSE60625 CLEC2B 9976 0 1 10
GSE74703 CLEC2B 9976 8 2 26
GSE74704 CLEC2B 9976 4 2 14
TCGA CLEC2B 9976 40 6 50

Total number of gains: 106; Total number of losses: 35; Total Number of normals: 347.  


 

Somatic mutations of CLEC2B:

 

Generating mutation plots.

 

Highly correlated genes for CLEC2B:

 

Showing top 20/169 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLEC2BCEP700.769798303
CLEC2BMORF4L10.750448303
CLEC2BPTPRK0.748062303
CLEC2BTSPAN50.723385404
CLEC2BMBTPS20.720383303
CLEC2BRPL26L10.711678303
CLEC2BWARS20.707688404
CLEC2BAXL0.69511303
CLEC2BGLIS30.687794303
CLEC2BSNX300.686899303
CLEC2BZKSCAN50.686383303
CLEC2BEIF2B10.685587303
CLEC2BMTCH10.678527303
CLEC2BPRDX30.678236403
CLEC2BJAK10.672236403
CLEC2BSERINC30.666808504
CLEC2BPCMTD20.664748403
CLEC2BDNAJB140.66473303
CLEC2BLRP110.664617303
CLEC2BPIGU0.663291303

For details and further investigation, click here