| Full name: calmin | Alias Symbol: FLJ12383|KIAA1188|KIAA0500 | ||
| Type: protein-coding gene | Cytoband: 14q32.13 | ||
| Entrez ID: 79789 | HGNC ID: HGNC:19972 | Ensembl Gene: ENSG00000165959 | OMIM ID: 611121 |
| Drug and gene relationship at DGIdb | |||
Expression of CLMN:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLMN | 79789 | 225757_s_at | 0.0425 | 0.9571 | |
| GSE20347 | CLMN | 79789 | 213839_at | -0.3773 | 0.0617 | |
| GSE23400 | CLMN | 79789 | 213839_at | -0.2370 | 0.0000 | |
| GSE26886 | CLMN | 79789 | 225757_s_at | 0.4605 | 0.0081 | |
| GSE29001 | CLMN | 79789 | 213839_at | -0.7068 | 0.0642 | |
| GSE38129 | CLMN | 79789 | 213839_at | -0.5069 | 0.0059 | |
| GSE45670 | CLMN | 79789 | 213839_at | -1.1134 | 0.0005 | |
| GSE53622 | CLMN | 79789 | 26183 | -0.4329 | 0.0021 | |
| GSE53624 | CLMN | 79789 | 26183 | -0.1810 | 0.1476 | |
| GSE63941 | CLMN | 79789 | 213839_at | 2.3317 | 0.0161 | |
| GSE77861 | CLMN | 79789 | 225757_s_at | -0.0685 | 0.6264 | |
| GSE97050 | CLMN | 79789 | A_23_P25706 | -0.0648 | 0.8160 | |
| SRP007169 | CLMN | 79789 | RNAseq | 1.2493 | 0.0098 | |
| SRP008496 | CLMN | 79789 | RNAseq | 1.1574 | 0.0201 | |
| SRP064894 | CLMN | 79789 | RNAseq | -0.0839 | 0.7714 | |
| SRP133303 | CLMN | 79789 | RNAseq | -0.5015 | 0.1288 | |
| SRP193095 | CLMN | 79789 | RNAseq | -0.3797 | 0.2204 | |
| SRP219564 | CLMN | 79789 | RNAseq | 0.0833 | 0.8812 | |
| TCGA | CLMN | 79789 | RNAseq | -0.7385 | 0.0000 |
Upregulated datasets: 3; Downregulated datasets: 1.
Survival by CLMN expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CLMN:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLMN | 79789 | 10 | 4 | 16 | |
| GSE20123 | CLMN | 79789 | 10 | 3 | 17 | |
| GSE43470 | CLMN | 79789 | 8 | 3 | 32 | |
| GSE46452 | CLMN | 79789 | 16 | 3 | 40 | |
| GSE47630 | CLMN | 79789 | 11 | 8 | 21 | |
| GSE54993 | CLMN | 79789 | 3 | 8 | 59 | |
| GSE54994 | CLMN | 79789 | 21 | 4 | 28 | |
| GSE60625 | CLMN | 79789 | 0 | 2 | 9 | |
| GSE74703 | CLMN | 79789 | 6 | 3 | 27 | |
| GSE74704 | CLMN | 79789 | 6 | 3 | 11 | |
| TCGA | CLMN | 79789 | 30 | 19 | 47 |
Total number of gains: 121; Total number of losses: 60; Total Number of normals: 307.
Somatic mutations of CLMN:
Generating mutation plots.
Highly correlated genes for CLMN:
Showing top 20/212 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLMN | SAFB2 | 0.764261 | 3 | 0 | 3 |
| CLMN | DICER1 | 0.742001 | 3 | 0 | 3 |
| CLMN | CRYBB2 | 0.728214 | 3 | 0 | 3 |
| CLMN | NIPSNAP3B | 0.723792 | 3 | 0 | 3 |
| CLMN | PRPS1L1 | 0.722137 | 3 | 0 | 3 |
| CLMN | SLC25A29 | 0.720872 | 4 | 0 | 4 |
| CLMN | ADAM15 | 0.717882 | 3 | 0 | 3 |
| CLMN | MPV17L | 0.707371 | 3 | 0 | 3 |
| CLMN | PRR12 | 0.706866 | 3 | 0 | 3 |
| CLMN | NGF | 0.704988 | 3 | 0 | 3 |
| CLMN | SETD1A | 0.704224 | 3 | 0 | 3 |
| CLMN | ADPRHL1 | 0.703619 | 3 | 0 | 3 |
| CLMN | ANGPTL6 | 0.700848 | 3 | 0 | 3 |
| CLMN | AK4 | 0.698168 | 3 | 0 | 3 |
| CLMN | CDC42BPG | 0.697655 | 3 | 0 | 3 |
| CLMN | SLC2A4RG | 0.697554 | 5 | 0 | 4 |
| CLMN | ACY1 | 0.688209 | 3 | 0 | 3 |
| CLMN | LRRC39 | 0.688184 | 3 | 0 | 3 |
| CLMN | RNASEH2B | 0.677646 | 3 | 0 | 3 |
| CLMN | SH2B2 | 0.677542 | 4 | 0 | 4 |
For details and further investigation, click here
