| Full name: nipsnap homolog 3B | Alias Symbol: FLJ11275 | ||
| Type: protein-coding gene | Cytoband: 9q31.1 | ||
| Entrez ID: 55335 | HGNC ID: HGNC:23641 | Ensembl Gene: ENSG00000165028 | OMIM ID: 608872 |
| Drug and gene relationship at DGIdb | |||
Expression of NIPSNAP3B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | NIPSNAP3B | 55335 | 223764_x_at | -0.6408 | 0.2028 | |
| GSE20347 | NIPSNAP3B | 55335 | 221104_s_at | 0.0640 | 0.3272 | |
| GSE23400 | NIPSNAP3B | 55335 | 221104_s_at | 0.0236 | 0.5532 | |
| GSE26886 | NIPSNAP3B | 55335 | 223764_x_at | 0.1013 | 0.6831 | |
| GSE29001 | NIPSNAP3B | 55335 | 221104_s_at | 0.0577 | 0.7840 | |
| GSE38129 | NIPSNAP3B | 55335 | 221104_s_at | -0.2713 | 0.1831 | |
| GSE45670 | NIPSNAP3B | 55335 | 223764_x_at | -1.1423 | 0.0000 | |
| GSE53622 | NIPSNAP3B | 55335 | 38203 | -0.6351 | 0.0000 | |
| GSE53624 | NIPSNAP3B | 55335 | 38203 | -0.5750 | 0.0000 | |
| GSE63941 | NIPSNAP3B | 55335 | 223764_x_at | -0.8233 | 0.2139 | |
| GSE77861 | NIPSNAP3B | 55335 | 221104_s_at | 0.0687 | 0.3453 | |
| GSE97050 | NIPSNAP3B | 55335 | A_24_P132624 | -0.1255 | 0.5982 | |
| SRP064894 | NIPSNAP3B | 55335 | RNAseq | -0.3346 | 0.1274 | |
| SRP133303 | NIPSNAP3B | 55335 | RNAseq | -1.3269 | 0.0000 | |
| SRP159526 | NIPSNAP3B | 55335 | RNAseq | 0.0641 | 0.8994 | |
| SRP193095 | NIPSNAP3B | 55335 | RNAseq | -0.2988 | 0.1815 | |
| SRP219564 | NIPSNAP3B | 55335 | RNAseq | -0.0410 | 0.9144 | |
| TCGA | NIPSNAP3B | 55335 | RNAseq | -0.2344 | 0.1962 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by NIPSNAP3B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of NIPSNAP3B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | NIPSNAP3B | 55335 | 4 | 10 | 16 | |
| GSE20123 | NIPSNAP3B | 55335 | 5 | 9 | 16 | |
| GSE43470 | NIPSNAP3B | 55335 | 7 | 3 | 33 | |
| GSE46452 | NIPSNAP3B | 55335 | 6 | 13 | 40 | |
| GSE47630 | NIPSNAP3B | 55335 | 1 | 17 | 22 | |
| GSE54993 | NIPSNAP3B | 55335 | 3 | 3 | 64 | |
| GSE54994 | NIPSNAP3B | 55335 | 9 | 10 | 34 | |
| GSE60625 | NIPSNAP3B | 55335 | 0 | 0 | 11 | |
| GSE74703 | NIPSNAP3B | 55335 | 6 | 3 | 27 | |
| GSE74704 | NIPSNAP3B | 55335 | 2 | 6 | 12 | |
| TCGA | NIPSNAP3B | 55335 | 26 | 21 | 49 |
Total number of gains: 69; Total number of losses: 95; Total Number of normals: 324.
Somatic mutations of NIPSNAP3B:
Generating mutation plots.
Highly correlated genes for NIPSNAP3B:
Showing top 20/681 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| NIPSNAP3B | ADAMTS9-AS2 | 0.819159 | 3 | 0 | 3 |
| NIPSNAP3B | NPY1R | 0.79344 | 4 | 0 | 4 |
| NIPSNAP3B | FIBIN | 0.781835 | 3 | 0 | 3 |
| NIPSNAP3B | RAB9B | 0.775737 | 4 | 0 | 4 |
| NIPSNAP3B | ZMAT1 | 0.77506 | 5 | 0 | 5 |
| NIPSNAP3B | ANGPTL1 | 0.762592 | 4 | 0 | 4 |
| NIPSNAP3B | ZFAND2A | 0.760712 | 3 | 0 | 3 |
| NIPSNAP3B | PMP2 | 0.756886 | 3 | 0 | 3 |
| NIPSNAP3B | RGS7BP | 0.750634 | 4 | 0 | 4 |
| NIPSNAP3B | PTCHD1 | 0.7432 | 3 | 0 | 3 |
| NIPSNAP3B | ASPA | 0.74292 | 5 | 0 | 5 |
| NIPSNAP3B | FENDRR | 0.739985 | 3 | 0 | 3 |
| NIPSNAP3B | TRAK1 | 0.737541 | 3 | 0 | 3 |
| NIPSNAP3B | EMCN | 0.732541 | 4 | 0 | 4 |
| NIPSNAP3B | RAPGEF1 | 0.730059 | 3 | 0 | 3 |
| NIPSNAP3B | PPP1R14A | 0.726294 | 3 | 0 | 3 |
| NIPSNAP3B | PDS5B | 0.725908 | 3 | 0 | 3 |
| NIPSNAP3B | ACO1 | 0.725214 | 3 | 0 | 3 |
| NIPSNAP3B | FBXL3 | 0.723972 | 4 | 0 | 4 |
| NIPSNAP3B | CLMN | 0.723792 | 3 | 0 | 3 |
For details and further investigation, click here
