PRR12

 

Full name: proline rich 12 Alias Symbol: 
Type: protein-coding gene Cytoband: 19q13.33
Entrez ID: 57479 HGNC ID: HGNC:29217 Ensembl Gene: ENSG00000126464 OMIM ID: 616633
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of PRR12:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PRR12 57479 226716_at 0.4900 0.2245
GSE26886 PRR12 57479 226716_at 0.5219 0.0002
GSE45670 PRR12 57479 226716_at 0.0771 0.5392
GSE63941 PRR12 57479 226716_at -0.0017 0.9954
GSE77861 PRR12 57479 226716_at 0.0748 0.7150
GSE97050 PRR12 57479 A_23_P55948 -0.1372 0.5429
SRP007169 PRR12 57479 RNAseq 1.2855 0.0057
SRP008496 PRR12 57479 RNAseq 0.7423 0.0263
SRP064894 PRR12 57479 RNAseq 0.7216 0.0011
SRP133303 PRR12 57479 RNAseq 0.1598 0.3515
SRP159526 PRR12 57479 RNAseq 0.7509 0.0035
SRP193095 PRR12 57479 RNAseq 0.5863 0.0052
SRP219564 PRR12 57479 RNAseq 0.4169 0.0653
TCGA PRR12 57479 RNAseq 0.0581 0.1937

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by PRR12 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of PRR12:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PRR12 57479 4 4 22
GSE20123 PRR12 57479 4 3 23
GSE43470 PRR12 57479 4 11 28
GSE46452 PRR12 57479 45 1 13
GSE47630 PRR12 57479 10 6 24
GSE54993 PRR12 57479 17 4 49
GSE54994 PRR12 57479 4 14 35
GSE60625 PRR12 57479 9 0 2
GSE74703 PRR12 57479 4 7 25
GSE74704 PRR12 57479 4 1 15
TCGA PRR12 57479 14 19 63

Total number of gains: 119; Total number of losses: 70; Total Number of normals: 299.  


 

Somatic mutations of PRR12:

 

Generating mutation plots.

 

Highly correlated genes for PRR12:

 

Showing top 20/578 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PRR12MEA10.838118303
PRR12ZNF5580.827853303
PRR12VAMP20.808573303
PRR12RSRC10.795394303
PRR12DROSHA0.792602303
PRR12TLN10.790129303
PRR12CCNT10.788291303
PRR12U2SURP0.787211303
PRR12PLXNA10.782407303
PRR12ZNF5030.781925303
PRR12GRWD10.777654303
PRR12PRRC2A0.773572303
PRR12SRRT0.772075403
PRR12CTBP20.770548303
PRR12PA2G40.7686303
PRR12CSTF2T0.767892303
PRR12CPSF60.766529303
PRR12SZT20.76638303
PRR12SENP50.76605303
PRR12SETD1A0.765902404

For details and further investigation, click here