| Full name: CKLF like MARVEL transmembrane domain containing 6 | Alias Symbol: FLJ20396 | ||
| Type: protein-coding gene | Cytoband: 3p22.3 | ||
| Entrez ID: 54918 | HGNC ID: HGNC:19177 | Ensembl Gene: ENSG00000091317 | OMIM ID: 607889 |
| Drug and gene relationship at DGIdb | |||
Expression of CMTM6:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CMTM6 | 54918 | 217947_at | 0.2578 | 0.5256 | |
| GSE20347 | CMTM6 | 54918 | 217947_at | -0.2961 | 0.0190 | |
| GSE23400 | CMTM6 | 54918 | 217947_at | 0.0109 | 0.8955 | |
| GSE26886 | CMTM6 | 54918 | 217947_at | -0.5144 | 0.0120 | |
| GSE29001 | CMTM6 | 54918 | 217947_at | -0.2278 | 0.4931 | |
| GSE38129 | CMTM6 | 54918 | 217947_at | -0.1255 | 0.4086 | |
| GSE45670 | CMTM6 | 54918 | 217947_at | 0.2300 | 0.0405 | |
| GSE53622 | CMTM6 | 54918 | 78223 | -0.1517 | 0.0681 | |
| GSE53624 | CMTM6 | 54918 | 78223 | -0.3496 | 0.0008 | |
| GSE63941 | CMTM6 | 54918 | 217947_at | -0.6167 | 0.2285 | |
| GSE77861 | CMTM6 | 54918 | 217947_at | -0.1485 | 0.4928 | |
| GSE97050 | CMTM6 | 54918 | A_24_P97526 | 0.4604 | 0.3717 | |
| SRP007169 | CMTM6 | 54918 | RNAseq | -0.1457 | 0.6851 | |
| SRP008496 | CMTM6 | 54918 | RNAseq | -0.2502 | 0.1661 | |
| SRP064894 | CMTM6 | 54918 | RNAseq | 0.0343 | 0.8592 | |
| SRP133303 | CMTM6 | 54918 | RNAseq | 0.1638 | 0.2207 | |
| SRP159526 | CMTM6 | 54918 | RNAseq | -0.2827 | 0.3466 | |
| SRP193095 | CMTM6 | 54918 | RNAseq | -0.6619 | 0.0000 | |
| SRP219564 | CMTM6 | 54918 | RNAseq | -0.4151 | 0.2310 | |
| TCGA | CMTM6 | 54918 | RNAseq | 0.0706 | 0.1283 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CMTM6 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CMTM6:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CMTM6 | 54918 | 0 | 18 | 12 | |
| GSE20123 | CMTM6 | 54918 | 0 | 18 | 12 | |
| GSE43470 | CMTM6 | 54918 | 1 | 20 | 22 | |
| GSE46452 | CMTM6 | 54918 | 2 | 17 | 40 | |
| GSE47630 | CMTM6 | 54918 | 1 | 25 | 14 | |
| GSE54993 | CMTM6 | 54918 | 6 | 3 | 61 | |
| GSE54994 | CMTM6 | 54918 | 1 | 32 | 20 | |
| GSE60625 | CMTM6 | 54918 | 5 | 0 | 6 | |
| GSE74703 | CMTM6 | 54918 | 1 | 17 | 18 | |
| GSE74704 | CMTM6 | 54918 | 0 | 12 | 8 | |
| TCGA | CMTM6 | 54918 | 2 | 69 | 25 |
Total number of gains: 19; Total number of losses: 231; Total Number of normals: 238.
Somatic mutations of CMTM6:
Generating mutation plots.
Highly correlated genes for CMTM6:
Showing top 20/654 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CMTM6 | UNC5CL | 0.83038 | 3 | 0 | 3 |
| CMTM6 | NDUFS1 | 0.817315 | 3 | 0 | 3 |
| CMTM6 | PARG | 0.802054 | 3 | 0 | 3 |
| CMTM6 | RRP36 | 0.784091 | 3 | 0 | 3 |
| CMTM6 | POLB | 0.781547 | 4 | 0 | 4 |
| CMTM6 | PGK1 | 0.779287 | 3 | 0 | 3 |
| CMTM6 | CNOT10 | 0.777135 | 3 | 0 | 3 |
| CMTM6 | LCMT1 | 0.777096 | 3 | 0 | 3 |
| CMTM6 | PPIL1 | 0.767575 | 4 | 0 | 4 |
| CMTM6 | ZBTB9 | 0.747505 | 3 | 0 | 3 |
| CMTM6 | RBBP6 | 0.742226 | 3 | 0 | 3 |
| CMTM6 | SMAD2 | 0.741189 | 3 | 0 | 3 |
| CMTM6 | TM2D2 | 0.73999 | 3 | 0 | 3 |
| CMTM6 | FAM200A | 0.734377 | 3 | 0 | 3 |
| CMTM6 | SPCS2 | 0.733681 | 4 | 0 | 4 |
| CMTM6 | ARPC1A | 0.73025 | 4 | 0 | 3 |
| CMTM6 | ORC4 | 0.728782 | 3 | 0 | 3 |
| CMTM6 | TRAPPC6B | 0.727442 | 3 | 0 | 3 |
| CMTM6 | ARPC4 | 0.724465 | 3 | 0 | 3 |
| CMTM6 | NXT2 | 0.723536 | 5 | 0 | 5 |
For details and further investigation, click here
