POLB

 

Full name: DNA polymerase beta Alias Symbol: 
Type: protein-coding gene Cytoband: 8p11.21
Entrez ID: 5423 HGNC ID: HGNC:9174 Ensembl Gene: ENSG00000070501 OMIM ID: 174760
Drug and gene relationship at DGIdb

 

Expression of POLB:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 POLB 5423 203616_at 0.4027 0.3681
GSE20347 POLB 5423 203616_at 0.3110 0.0607
GSE23400 POLB 5423 203616_at 0.1340 0.1562
GSE26886 POLB 5423 203616_at -0.8997 0.0043
GSE29001 POLB 5423 203616_at -0.0036 0.9921
GSE38129 POLB 5423 203616_at 0.3792 0.0148
GSE45670 POLB 5423 203616_at 0.5633 0.0043
GSE53622 POLB 5423 24062 0.1841 0.0793
GSE53624 POLB 5423 24062 -0.0838 0.4007
GSE63941 POLB 5423 203616_at -0.1217 0.7792
GSE77861 POLB 5423 203616_at -0.2088 0.5529
GSE97050 POLB 5423 A_32_P34552 0.3825 0.2611
SRP007169 POLB 5423 RNAseq -0.2615 0.5891
SRP008496 POLB 5423 RNAseq -0.3351 0.2555
SRP064894 POLB 5423 RNAseq -0.1455 0.4980
SRP133303 POLB 5423 RNAseq 0.3450 0.1496
SRP159526 POLB 5423 RNAseq -0.2067 0.5368
SRP193095 POLB 5423 RNAseq -0.1076 0.5671
SRP219564 POLB 5423 RNAseq -0.0710 0.8379
TCGA POLB 5423 RNAseq 0.3715 0.0001

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by POLB expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of POLB:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 POLB 5423 10 5 15
GSE20123 POLB 5423 10 5 15
GSE43470 POLB 5423 9 6 28
GSE46452 POLB 5423 19 5 35
GSE47630 POLB 5423 22 1 17
GSE54993 POLB 5423 1 16 53
GSE54994 POLB 5423 19 7 27
GSE60625 POLB 5423 3 0 8
GSE74703 POLB 5423 8 5 23
GSE74704 POLB 5423 9 2 9
TCGA POLB 5423 41 22 33

Total number of gains: 151; Total number of losses: 74; Total Number of normals: 263.  


 

Somatic mutations of POLB:

 

Generating mutation plots.

 

Highly correlated genes for POLB:

 

Showing top 20/250 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
POLBXRCC60.841461303
POLBCMTM60.781547404
POLBTHAP110.752598303
POLBCDC1230.748851403
POLBARPC1A0.743528404
POLBFBXO160.729024303
POLBCSTF30.721713303
POLBASF1A0.720099303
POLBRAB2A0.713293404
POLBHAS30.710662303
POLBFAF20.706399303
POLBPSMD10.705043303
POLBSLAMF70.701253303
POLBCDCA20.700924303
POLBCIAPIN10.699317403
POLBARPC30.699036404
POLBASCC30.693263303
POLBTPST20.688489303
POLBPSMD70.685673303
POLBPRDX40.685526403

For details and further investigation, click here