| Full name: cysteine and serine rich nuclear protein 3 | Alias Symbol: FLJ32093|TAIP-2|PPP1R73 | ||
| Type: protein-coding gene | Cytoband: 2q24.3 | ||
| Entrez ID: 80034 | HGNC ID: HGNC:30729 | Ensembl Gene: ENSG00000178662 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CSRNP3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CSRNP3 | 80034 | 235017_s_at | 0.2318 | 0.5791 | |
| GSE20347 | CSRNP3 | 80034 | 220462_at | -0.1236 | 0.4655 | |
| GSE23400 | CSRNP3 | 80034 | 220462_at | -0.0312 | 0.3405 | |
| GSE26886 | CSRNP3 | 80034 | 235017_s_at | -0.2300 | 0.4587 | |
| GSE29001 | CSRNP3 | 80034 | 220462_at | -0.3976 | 0.5839 | |
| GSE38129 | CSRNP3 | 80034 | 220462_at | -0.1518 | 0.3849 | |
| GSE45670 | CSRNP3 | 80034 | 235355_at | -0.7825 | 0.0493 | |
| GSE53622 | CSRNP3 | 80034 | 100822 | -0.8107 | 0.0000 | |
| GSE53624 | CSRNP3 | 80034 | 100822 | -0.1809 | 0.0843 | |
| GSE63941 | CSRNP3 | 80034 | 235017_s_at | 0.0998 | 0.7574 | |
| GSE77861 | CSRNP3 | 80034 | 235017_s_at | 0.0086 | 0.9820 | |
| GSE97050 | CSRNP3 | 80034 | A_33_P3420043 | -0.5125 | 0.3799 | |
| SRP007169 | CSRNP3 | 80034 | RNAseq | -1.0055 | 0.1956 | |
| SRP064894 | CSRNP3 | 80034 | RNAseq | -0.1967 | 0.5061 | |
| SRP133303 | CSRNP3 | 80034 | RNAseq | -0.3784 | 0.1905 | |
| SRP159526 | CSRNP3 | 80034 | RNAseq | -0.3554 | 0.4607 | |
| SRP193095 | CSRNP3 | 80034 | RNAseq | -0.5552 | 0.0077 | |
| SRP219564 | CSRNP3 | 80034 | RNAseq | -0.1549 | 0.8363 | |
| TCGA | CSRNP3 | 80034 | RNAseq | -0.4011 | 0.2614 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CSRNP3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CSRNP3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CSRNP3 | 80034 | 5 | 1 | 24 | |
| GSE20123 | CSRNP3 | 80034 | 4 | 1 | 25 | |
| GSE43470 | CSRNP3 | 80034 | 5 | 1 | 37 | |
| GSE46452 | CSRNP3 | 80034 | 1 | 4 | 54 | |
| GSE47630 | CSRNP3 | 80034 | 5 | 3 | 32 | |
| GSE54993 | CSRNP3 | 80034 | 0 | 5 | 65 | |
| GSE54994 | CSRNP3 | 80034 | 11 | 2 | 40 | |
| GSE60625 | CSRNP3 | 80034 | 0 | 3 | 8 | |
| GSE74703 | CSRNP3 | 80034 | 4 | 1 | 31 | |
| GSE74704 | CSRNP3 | 80034 | 2 | 0 | 18 | |
| TCGA | CSRNP3 | 80034 | 25 | 9 | 62 |
Total number of gains: 62; Total number of losses: 30; Total Number of normals: 396.
Somatic mutations of CSRNP3:
Generating mutation plots.
Highly correlated genes for CSRNP3:
Showing top 20/52 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CSRNP3 | CBX7 | 0.654297 | 4 | 0 | 4 |
| CSRNP3 | SH3BGR | 0.641704 | 3 | 0 | 3 |
| CSRNP3 | CACNA2D2 | 0.609922 | 3 | 0 | 3 |
| CSRNP3 | INSM1 | 0.607872 | 3 | 0 | 3 |
| CSRNP3 | KLHL23 | 0.607395 | 3 | 0 | 3 |
| CSRNP3 | GNAL | 0.598086 | 4 | 0 | 3 |
| CSRNP3 | ZBTB4 | 0.597289 | 4 | 0 | 3 |
| CSRNP3 | TSHZ1 | 0.590262 | 3 | 0 | 3 |
| CSRNP3 | TCEAL1 | 0.579294 | 5 | 0 | 4 |
| CSRNP3 | ZBED3 | 0.575868 | 5 | 0 | 3 |
| CSRNP3 | RBPMS2 | 0.574351 | 4 | 0 | 3 |
| CSRNP3 | CNTNAP2 | 0.574159 | 3 | 0 | 3 |
| CSRNP3 | CLYBL | 0.57168 | 5 | 0 | 5 |
| CSRNP3 | NFIX | 0.567553 | 4 | 0 | 3 |
| CSRNP3 | TAPT1-AS1 | 0.564635 | 4 | 0 | 3 |
| CSRNP3 | TCEA3 | 0.562204 | 3 | 0 | 3 |
| CSRNP3 | RNF103 | 0.559826 | 4 | 0 | 4 |
| CSRNP3 | PPP1R12B | 0.557524 | 4 | 0 | 3 |
| CSRNP3 | HOXA5 | 0.556797 | 4 | 0 | 3 |
| CSRNP3 | DISP1 | 0.553735 | 5 | 0 | 4 |
For details and further investigation, click here
