ABCG2

 

Full name: ATP binding cassette subfamily G member 2 (Junior blood group) Alias Symbol: EST157481|MXR|BCRP|ABCP|CD338
Type: protein-coding gene Cytoband: 4q22.1
Entrez ID: 9429 HGNC ID: HGNC:74 Ensembl Gene: ENSG00000118777 OMIM ID: 603756
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ABCG2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ABCG2 9429 209735_at -0.5622 0.1566
GSE20347 ABCG2 9429 209735_at -0.1290 0.3441
GSE23400 ABCG2 9429 209735_at -0.0550 0.2544
GSE26886 ABCG2 9429 209735_at -1.2507 0.0001
GSE29001 ABCG2 9429 209735_at -0.5475 0.0179
GSE38129 ABCG2 9429 209735_at -0.3525 0.0185
GSE45670 ABCG2 9429 209735_at -0.9885 0.0033
GSE53622 ABCG2 9429 92775 -1.2383 0.0000
GSE53624 ABCG2 9429 24204 -0.5592 0.0002
GSE63941 ABCG2 9429 209735_at 0.0446 0.9783
GSE77861 ABCG2 9429 209735_at -0.1654 0.3061
GSE97050 ABCG2 9429 A_33_P3361067 -0.1011 0.6886
SRP007169 ABCG2 9429 RNAseq 0.7012 0.1437
SRP064894 ABCG2 9429 RNAseq -0.5926 0.0442
SRP133303 ABCG2 9429 RNAseq -1.2525 0.0000
SRP159526 ABCG2 9429 RNAseq -0.5554 0.5465
SRP193095 ABCG2 9429 RNAseq -0.5390 0.0567
SRP219564 ABCG2 9429 RNAseq -0.3650 0.6152
TCGA ABCG2 9429 RNAseq -0.4620 0.0404

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by ABCG2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ABCG2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ABCG2 9429 3 12 15
GSE20123 ABCG2 9429 3 12 15
GSE43470 ABCG2 9429 0 13 30
GSE46452 ABCG2 9429 1 36 22
GSE47630 ABCG2 9429 0 20 20
GSE54993 ABCG2 9429 8 0 62
GSE54994 ABCG2 9429 1 10 42
GSE60625 ABCG2 9429 0 0 11
GSE74703 ABCG2 9429 0 11 25
GSE74704 ABCG2 9429 2 7 11
TCGA ABCG2 9429 12 37 47

Total number of gains: 30; Total number of losses: 158; Total Number of normals: 300.  


 

Somatic mutations of ABCG2:

 

Generating mutation plots.

 

Highly correlated genes for ABCG2:

 

Showing top 20/1061 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ABCG2CETN20.747787303
ABCG2PPP1R110.742279303
ABCG2NDUFA100.734357303
ABCG2DEF80.733445303
ABCG2ZNF1430.725352303
ABCG2PPP2CB0.72196303
ABCG2USP9X0.718828303
ABCG2RECQL50.710148303
ABCG2FBXO80.709978606
ABCG2SLITRK40.709401303
ABCG2KDM3A0.704803303
ABCG2PRKAG10.704261404
ABCG2TYW30.703363303
ABCG2PPP1R3B0.700408303
ABCG2DLD0.699949403
ABCG2LTN10.697888303
ABCG2CBR40.697064403
ABCG2CCND30.695846303
ABCG2CAPZA20.693453403
ABCG2TMX30.689476303

For details and further investigation, click here