DKK4

 

Full name: dickkopf WNT signaling pathway inhibitor 4 Alias Symbol: 
Type: protein-coding gene Cytoband: 8p11.21
Entrez ID: 27121 HGNC ID: HGNC:2894 Ensembl Gene: ENSG00000104371 OMIM ID: 605417
Drug and gene relationship at DGIdb

 

DKK4 involved pathways:

KEGG pathway Description View
hsa04310Wnt signaling pathway

 

Expression of DKK4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DKK4 27121 206619_at -0.9705 0.0616
GSE20347 DKK4 27121 206619_at -0.4480 0.0000
GSE23400 DKK4 27121 206619_at -0.4799 0.0000
GSE26886 DKK4 27121 206619_at -0.8189 0.0001
GSE29001 DKK4 27121 206619_at -1.0626 0.0001
GSE38129 DKK4 27121 206619_at -0.6131 0.0000
GSE45670 DKK4 27121 206619_at -0.4992 0.1481
GSE53622 DKK4 27121 28762 -2.1521 0.0000
GSE53624 DKK4 27121 28762 -3.0094 0.0000
GSE63941 DKK4 27121 206619_at 0.0698 0.6165
GSE77861 DKK4 27121 206619_at -0.6904 0.0357
GSE97050 DKK4 27121 A_23_P94275 -0.3476 0.3062
SRP007169 DKK4 27121 RNAseq -5.4735 0.0000
SRP064894 DKK4 27121 RNAseq -4.4556 0.0000
SRP133303 DKK4 27121 RNAseq -3.5171 0.0000
SRP159526 DKK4 27121 RNAseq -4.4706 0.0000
SRP219564 DKK4 27121 RNAseq -1.8934 0.0682
TCGA DKK4 27121 RNAseq -0.7645 0.4110

Upregulated datasets: 0; Downregulated datasets: 7.  


 

Survival by DKK4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DKK4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DKK4 27121 10 5 15
GSE20123 DKK4 27121 10 5 15
GSE43470 DKK4 27121 9 6 28
GSE46452 DKK4 27121 19 5 35
GSE47630 DKK4 27121 22 1 17
GSE54993 DKK4 27121 1 16 53
GSE54994 DKK4 27121 19 7 27
GSE60625 DKK4 27121 3 0 8
GSE74703 DKK4 27121 8 5 23
GSE74704 DKK4 27121 9 2 9
TCGA DKK4 27121 41 21 34

Total number of gains: 151; Total number of losses: 73; Total Number of normals: 264.  


 

Somatic mutations of DKK4:

 

Generating mutation plots.

 

Highly correlated genes for DKK4:

 

Showing top 20/980 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DKK4FAM163B0.842041303
DKK4CLDN170.7925310010
DKK4GYS20.77993210010
DKK4OR2Z10.773654303
DKK4IL36A0.77354311011
DKK4NCCRP10.773406303
DKK4MFSD2B0.773353303
DKK4MUC220.771439303
DKK4TRIP100.76964110010
DKK4KLKB10.767872606
DKK4KRTAP20-10.766037303
DKK4PRSS20.760892909
DKK4ENDOU0.75968310010
DKK4TEN10.759052303
DKK4PRSS270.758959707
DKK4MAPK30.7581410010
DKK4KPRP0.756831303
DKK4CAPN50.75592410010
DKK4FAM214A0.755811606
DKK4ST3GAL40.75381711011

For details and further investigation, click here