EMC3

 

Full name: ER membrane protein complex subunit 3 Alias Symbol: 
Type: protein-coding gene Cytoband: 3p25.3
Entrez ID: 55831 HGNC ID: HGNC:23999 Ensembl Gene: ENSG00000125037 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of EMC3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EMC3 55831 217882_at -0.4569 0.1942
GSE20347 EMC3 55831 217882_at -1.1505 0.0000
GSE23400 EMC3 55831 217882_at -0.8575 0.0000
GSE26886 EMC3 55831 217882_at -1.2290 0.0000
GSE29001 EMC3 55831 217882_at -1.3552 0.0012
GSE38129 EMC3 55831 217882_at -0.8920 0.0000
GSE45670 EMC3 55831 217882_at -0.4620 0.0134
GSE53622 EMC3 55831 32062 -1.0776 0.0000
GSE53624 EMC3 55831 32062 -1.3423 0.0000
GSE63941 EMC3 55831 217882_at -0.6905 0.1102
GSE77861 EMC3 55831 217882_at -0.8798 0.0042
SRP007169 EMC3 55831 RNAseq -2.2908 0.0000
SRP008496 EMC3 55831 RNAseq -2.2195 0.0000
SRP064894 EMC3 55831 RNAseq -1.1362 0.0000
SRP133303 EMC3 55831 RNAseq -0.8406 0.0000
SRP159526 EMC3 55831 RNAseq -1.2018 0.0000
SRP193095 EMC3 55831 RNAseq -1.1617 0.0000
SRP219564 EMC3 55831 RNAseq -1.3922 0.0000

Upregulated datasets: 0; Downregulated datasets: 11.  


 

Survival by EMC3 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of EMC3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EMC3 55831 1 18 11
GSE20123 EMC3 55831 1 18 11
GSE43470 EMC3 55831 1 20 22
GSE46452 EMC3 55831 2 17 40
GSE47630 EMC3 55831 2 23 15
GSE54993 EMC3 55831 6 1 63
GSE54994 EMC3 55831 3 31 19
GSE60625 EMC3 55831 5 0 6
GSE74703 EMC3 55831 1 16 19
GSE74704 EMC3 55831 1 11 8
TCGA EMC3 55831 5 65 26

Total number of gains: 28; Total number of losses: 220; Total Number of normals: 240.  


 

Somatic mutations of EMC3:

 

Generating mutation plots.

 

Highly correlated genes for EMC3:

 

Showing top 20/1646 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EMC3SERPINB10.80316810010
EMC3CAPN140.802352606
EMC3ZNF1850.80052810010
EMC3HIGD1A0.80045910010
EMC3RANBP90.79863310010
EMC3CXCR20.79677210010
EMC3TMOD30.79392210010
EMC3UBL30.79104611011
EMC3PRSS270.790476606
EMC3BNIPL0.789089606
EMC3KAT2B0.78821111011
EMC3GDPD30.78597510010
EMC3RAB11A0.78580310010
EMC3RNF1410.78378910010
EMC3MRPS360.783241606
EMC3ABHD50.7807511010
EMC3PDCD6IP0.78063510010
EMC3ACPP0.78006210010
EMC3CYSRT10.780005606
EMC3ENDOU0.77983210010

For details and further investigation, click here