EXOSC7

 

Full name: exosome component 7 Alias Symbol: hRrp42p|Rrp42p|RRP42|EAP1|KIAA0116|p8
Type: protein-coding gene Cytoband: 3p21.31
Entrez ID: 23016 HGNC ID: HGNC:28112 Ensembl Gene: ENSG00000075914 OMIM ID: 606488
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of EXOSC7:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EXOSC7 23016 212627_s_at -0.0949 0.7447
GSE20347 EXOSC7 23016 212627_s_at -0.0780 0.6157
GSE23400 EXOSC7 23016 212627_s_at 0.0212 0.7702
GSE26886 EXOSC7 23016 212627_s_at -0.1940 0.5292
GSE29001 EXOSC7 23016 212627_s_at -0.2648 0.3137
GSE38129 EXOSC7 23016 212627_s_at 0.0515 0.6858
GSE45670 EXOSC7 23016 212627_s_at -0.1637 0.1659
GSE53622 EXOSC7 23016 44619 -0.5674 0.0000
GSE53624 EXOSC7 23016 44619 -0.5510 0.0000
GSE63941 EXOSC7 23016 212627_s_at 0.4358 0.1940
GSE77861 EXOSC7 23016 212627_s_at -0.1885 0.1440
GSE97050 EXOSC7 23016 A_23_P58102 -0.0434 0.9273
SRP007169 EXOSC7 23016 RNAseq 0.6136 0.1651
SRP008496 EXOSC7 23016 RNAseq 0.3161 0.3189
SRP064894 EXOSC7 23016 RNAseq -0.0583 0.7693
SRP133303 EXOSC7 23016 RNAseq -0.3730 0.0142
SRP159526 EXOSC7 23016 RNAseq -0.0661 0.7757
SRP193095 EXOSC7 23016 RNAseq -0.3198 0.0048
SRP219564 EXOSC7 23016 RNAseq -0.1887 0.5751
TCGA EXOSC7 23016 RNAseq -0.0359 0.5420

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by EXOSC7 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EXOSC7:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EXOSC7 23016 0 17 13
GSE20123 EXOSC7 23016 0 17 13
GSE43470 EXOSC7 23016 0 21 22
GSE46452 EXOSC7 23016 2 17 40
GSE47630 EXOSC7 23016 1 24 15
GSE54993 EXOSC7 23016 7 2 61
GSE54994 EXOSC7 23016 0 35 18
GSE60625 EXOSC7 23016 5 0 6
GSE74703 EXOSC7 23016 0 16 20
GSE74704 EXOSC7 23016 0 12 8
TCGA EXOSC7 23016 1 74 21

Total number of gains: 16; Total number of losses: 235; Total Number of normals: 237.  


 

Somatic mutations of EXOSC7:

 

Generating mutation plots.

 

Highly correlated genes for EXOSC7:

 

Showing top 20/244 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EXOSC7OR10G80.773878303
EXOSC7MIXL10.759672303
EXOSC7RIPK40.741197303
EXOSC7KLHL100.740957404
EXOSC7SDR42E10.710681303
EXOSC7PTK60.705482504
EXOSC7NEK100.69725303
EXOSC7TMEM370.691878303
EXOSC7GPT0.680464303
EXOSC7ECHDC30.679404504
EXOSC7GGT60.675642403
EXOSC7PPL0.673279404
EXOSC7PRSS80.671715303
EXOSC7EFNA50.670606404
EXOSC7SLC25A470.669429303
EXOSC7TEX13A0.668054303
EXOSC7C19orf530.667298404
EXOSC7CROT0.662085404
EXOSC7AZU10.660865303
EXOSC7SEMA3F0.657302403

For details and further investigation, click here