FAM135B

 

Full name: family with sequence similarity 135 member B Alias Symbol: C8ORFK32
Type: protein-coding gene Cytoband: 8q24.23
Entrez ID: 51059 HGNC ID: HGNC:28029 Ensembl Gene: ENSG00000147724 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of FAM135B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM135B 51059 224001_at -0.1827 0.5703
GSE26886 FAM135B 51059 224001_at -0.1614 0.2867
GSE45670 FAM135B 51059 224001_at 0.0477 0.7098
GSE53622 FAM135B 51059 107771 -0.9259 0.0000
GSE53624 FAM135B 51059 13244 -0.4342 0.0339
GSE63941 FAM135B 51059 224001_at 0.0101 0.9586
GSE77861 FAM135B 51059 224001_at -0.1525 0.1554
TCGA FAM135B 51059 RNAseq -3.6345 0.0000

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by FAM135B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM135B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM135B 51059 16 0 14
GSE20123 FAM135B 51059 16 0 14
GSE43470 FAM135B 51059 23 1 19
GSE46452 FAM135B 51059 27 0 32
GSE47630 FAM135B 51059 24 0 16
GSE54993 FAM135B 51059 0 25 45
GSE54994 FAM135B 51059 39 1 13
GSE60625 FAM135B 51059 3 4 4
GSE74703 FAM135B 51059 20 0 16
GSE74704 FAM135B 51059 11 0 9
TCGA FAM135B 51059 65 2 29

Total number of gains: 244; Total number of losses: 33; Total Number of normals: 211.  


 

Somatic mutations of FAM135B:

 

Generating mutation plots.

 

Highly correlated genes for FAM135B:

 

Showing top 20/174 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM135BANHX0.676786303
FAM135BRHD0.674298303
FAM135BDEFB1180.655134404
FAM135BTMEM2530.654496303
FAM135BRREB10.649762303
FAM135BTMEM1090.640587303
FAM135BPRRX2-AS10.636592303
FAM135BCST80.635817303
FAM135BRAB4B0.634838303
FAM135BACRBP0.634446303
FAM135BC19orf570.634236303
FAM135BPLLP0.632627303
FAM135BOR2J30.631478303
FAM135BCBLN40.628612403
FAM135BINSL30.626885303
FAM135BTIAF10.626397404
FAM135BOR4D20.62572505
FAM135BCLPS0.62472303
FAM135BPRKAR1B0.619567303
FAM135BPACRG0.618445303

For details and further investigation, click here