FAM83A

 

Full name: family with sequence similarity 83 member A Alias Symbol: MGC14128|BJ-TSA-9
Type: protein-coding gene Cytoband: 8q24.13
Entrez ID: 84985 HGNC ID: HGNC:28210 Ensembl Gene: ENSG00000147689 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of FAM83A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM83A 84985 239586_at 0.3794 0.7917
GSE26886 FAM83A 84985 239586_at -1.4652 0.0036
GSE45670 FAM83A 84985 239586_at 0.8986 0.0079
GSE53622 FAM83A 84985 20298 -0.3764 0.4355
GSE53624 FAM83A 84985 20298 -1.0610 0.0000
GSE63941 FAM83A 84985 239586_at 0.8352 0.3754
GSE77861 FAM83A 84985 239586_at -0.4597 0.1911
GSE97050 FAM83A 84985 A_24_P43810 1.5903 0.2110
SRP007169 FAM83A 84985 RNAseq -3.0499 0.0000
SRP008496 FAM83A 84985 RNAseq -2.6490 0.0001
SRP064894 FAM83A 84985 RNAseq -0.7025 0.1747
SRP133303 FAM83A 84985 RNAseq -0.1200 0.7240
SRP159526 FAM83A 84985 RNAseq -2.6213 0.0019
SRP193095 FAM83A 84985 RNAseq -0.5321 0.2723
SRP219564 FAM83A 84985 RNAseq -0.3682 0.7816
TCGA FAM83A 84985 RNAseq 1.7103 0.0000

Upregulated datasets: 1; Downregulated datasets: 5.  


 

Survival by FAM83A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM83A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM83A 84985 19 1 10
GSE20123 FAM83A 84985 20 1 9
GSE43470 FAM83A 84985 22 0 21
GSE46452 FAM83A 84985 27 0 32
GSE47630 FAM83A 84985 24 0 16
GSE54993 FAM83A 84985 0 21 49
GSE54994 FAM83A 84985 37 1 15
GSE60625 FAM83A 84985 0 4 7
GSE74703 FAM83A 84985 19 0 17
GSE74704 FAM83A 84985 13 1 6
TCGA FAM83A 84985 67 1 28

Total number of gains: 248; Total number of losses: 30; Total Number of normals: 210.  


 

Somatic mutations of FAM83A:

 

Generating mutation plots.

 

Highly correlated genes for FAM83A:

 

Showing top 20/511 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM83ACDCP10.728816606
FAM83ACNN20.721901303
FAM83APNPO0.714417303
FAM83ASERINC20.708699504
FAM83ADUSP70.706275505
FAM83AGNA150.701597908
FAM83ASERBP10.701434303
FAM83ARAB380.700988707
FAM83AGSDMC0.700951606
FAM83ACARHSP10.692156706
FAM83AS100A20.691912707
FAM83AKCNK60.685375707
FAM83AJUP0.679564806
FAM83AKRT6C0.67891404
FAM83ARAD51B0.678118303
FAM83AVSNL10.675185504
FAM83ASERPINB50.670811706
FAM83APPP4C0.669653505
FAM83ARHOD0.667926707
FAM83AHK20.665963605

For details and further investigation, click here