| Full name: visinin like 1 | Alias Symbol: VILIP|HPCAL3|HUVISL1|HLP3|VILIP-1 | ||
| Type: protein-coding gene | Cytoband: 2p24.2 | ||
| Entrez ID: 7447 | HGNC ID: HGNC:12722 | Ensembl Gene: ENSG00000163032 | OMIM ID: 600817 |
| Drug and gene relationship at DGIdb | |||
Expression of VSNL1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VSNL1 | 7447 | 203797_at | -0.1717 | 0.8706 | |
| GSE20347 | VSNL1 | 7447 | 203797_at | -0.3724 | 0.1356 | |
| GSE23400 | VSNL1 | 7447 | 203797_at | 0.0904 | 0.5504 | |
| GSE26886 | VSNL1 | 7447 | 203797_at | -0.6922 | 0.0206 | |
| GSE29001 | VSNL1 | 7447 | 203797_at | -0.1495 | 0.8113 | |
| GSE38129 | VSNL1 | 7447 | 203797_at | 0.4262 | 0.3780 | |
| GSE45670 | VSNL1 | 7447 | 203797_at | 0.3132 | 0.0834 | |
| GSE53622 | VSNL1 | 7447 | 44916 | -0.1799 | 0.4195 | |
| GSE53624 | VSNL1 | 7447 | 44916 | -0.2072 | 0.1689 | |
| GSE63941 | VSNL1 | 7447 | 203797_at | 3.3508 | 0.0333 | |
| GSE77861 | VSNL1 | 7447 | 203797_at | -0.1400 | 0.6708 | |
| GSE97050 | VSNL1 | 7447 | A_23_P209978 | 0.3209 | 0.6706 | |
| SRP007169 | VSNL1 | 7447 | RNAseq | 0.0941 | 0.8650 | |
| SRP008496 | VSNL1 | 7447 | RNAseq | -0.1456 | 0.7389 | |
| SRP064894 | VSNL1 | 7447 | RNAseq | -0.2761 | 0.4734 | |
| SRP133303 | VSNL1 | 7447 | RNAseq | -0.0036 | 0.9903 | |
| SRP159526 | VSNL1 | 7447 | RNAseq | -0.5973 | 0.0771 | |
| SRP193095 | VSNL1 | 7447 | RNAseq | -0.3964 | 0.2954 | |
| SRP219564 | VSNL1 | 7447 | RNAseq | -1.0344 | 0.2645 | |
| TCGA | VSNL1 | 7447 | RNAseq | 1.2091 | 0.0000 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by VSNL1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of VSNL1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | VSNL1 | 7447 | 10 | 2 | 18 | |
| GSE20123 | VSNL1 | 7447 | 10 | 2 | 18 | |
| GSE43470 | VSNL1 | 7447 | 2 | 0 | 41 | |
| GSE46452 | VSNL1 | 7447 | 3 | 4 | 52 | |
| GSE47630 | VSNL1 | 7447 | 7 | 0 | 33 | |
| GSE54993 | VSNL1 | 7447 | 0 | 7 | 63 | |
| GSE54994 | VSNL1 | 7447 | 10 | 0 | 43 | |
| GSE60625 | VSNL1 | 7447 | 0 | 3 | 8 | |
| GSE74703 | VSNL1 | 7447 | 2 | 0 | 34 | |
| GSE74704 | VSNL1 | 7447 | 9 | 2 | 9 | |
| TCGA | VSNL1 | 7447 | 36 | 3 | 57 |
Total number of gains: 89; Total number of losses: 23; Total Number of normals: 376.
Somatic mutations of VSNL1:
Generating mutation plots.
Highly correlated genes for VSNL1:
Showing top 20/453 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VSNL1 | RNF144B | 0.701211 | 3 | 0 | 3 |
| VSNL1 | DUSP18 | 0.694832 | 3 | 0 | 3 |
| VSNL1 | APRT | 0.691635 | 4 | 0 | 4 |
| VSNL1 | CCNYL1 | 0.68834 | 3 | 0 | 3 |
| VSNL1 | SLC35E3 | 0.68255 | 3 | 0 | 3 |
| VSNL1 | ADAMTSL5 | 0.681919 | 3 | 0 | 3 |
| VSNL1 | SEC11A | 0.681381 | 3 | 0 | 3 |
| VSNL1 | FAM83A | 0.675185 | 5 | 0 | 4 |
| VSNL1 | CKMT1A | 0.674672 | 3 | 0 | 3 |
| VSNL1 | BCS1L | 0.669422 | 3 | 0 | 3 |
| VSNL1 | IFT46 | 0.667208 | 3 | 0 | 3 |
| VSNL1 | KIF21A | 0.666859 | 4 | 0 | 3 |
| VSNL1 | PYGL | 0.666683 | 4 | 0 | 3 |
| VSNL1 | SRD5A1 | 0.660735 | 9 | 0 | 9 |
| VSNL1 | DPH6 | 0.658975 | 3 | 0 | 3 |
| VSNL1 | HMGA1 | 0.658289 | 4 | 0 | 4 |
| VSNL1 | PNN | 0.657106 | 3 | 0 | 3 |
| VSNL1 | EPHA2 | 0.656972 | 5 | 0 | 5 |
| VSNL1 | PRPF38B | 0.656242 | 4 | 0 | 4 |
| VSNL1 | ESYT2 | 0.654588 | 3 | 0 | 3 |
For details and further investigation, click here
