| Full name: FGD5 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3p25.1 | ||
| Entrez ID: 100505641 | HGNC ID: HGNC:40410 | Ensembl Gene: ENSG00000225733 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of FGD5-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FGD5-AS1 | 100505641 | 224644_at | -0.2992 | 0.4877 | |
| GSE26886 | FGD5-AS1 | 100505641 | 224644_at | -1.2188 | 0.0000 | |
| GSE45670 | FGD5-AS1 | 100505641 | 224644_at | -0.5043 | 0.0022 | |
| GSE53622 | FGD5-AS1 | 100505641 | 131651 | -0.6006 | 0.0000 | |
| GSE53624 | FGD5-AS1 | 100505641 | 131651 | -0.5349 | 0.0000 | |
| GSE63941 | FGD5-AS1 | 100505641 | 224644_at | -0.7001 | 0.1168 | |
| GSE77861 | FGD5-AS1 | 100505641 | 224644_at | -0.4243 | 0.0765 | |
| SRP007169 | FGD5-AS1 | 100505641 | RNAseq | -0.2342 | 0.4991 | |
| SRP008496 | FGD5-AS1 | 100505641 | RNAseq | 0.0695 | 0.7575 | |
| SRP064894 | FGD5-AS1 | 100505641 | RNAseq | -0.2420 | 0.2007 | |
| SRP133303 | FGD5-AS1 | 100505641 | RNAseq | -0.1736 | 0.1254 | |
| SRP159526 | FGD5-AS1 | 100505641 | RNAseq | -0.3687 | 0.0319 | |
| SRP193095 | FGD5-AS1 | 100505641 | RNAseq | -0.4744 | 0.0001 | |
| SRP219564 | FGD5-AS1 | 100505641 | RNAseq | -0.4918 | 0.1940 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by FGD5-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of FGD5-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FGD5-AS1 | 100505641 | 1 | 19 | 10 | |
| GSE20123 | FGD5-AS1 | 100505641 | 1 | 19 | 10 | |
| GSE43470 | FGD5-AS1 | 100505641 | 0 | 21 | 22 | |
| GSE46452 | FGD5-AS1 | 100505641 | 2 | 17 | 40 | |
| GSE47630 | FGD5-AS1 | 100505641 | 2 | 23 | 15 | |
| GSE54993 | FGD5-AS1 | 100505641 | 6 | 1 | 63 | |
| GSE54994 | FGD5-AS1 | 100505641 | 1 | 32 | 20 | |
| GSE60625 | FGD5-AS1 | 100505641 | 5 | 0 | 6 | |
| GSE74703 | FGD5-AS1 | 100505641 | 0 | 17 | 19 | |
| GSE74704 | FGD5-AS1 | 100505641 | 1 | 12 | 7 |
Total number of gains: 19; Total number of losses: 161; Total Number of normals: 212.
Somatic mutations of FGD5-AS1:
Generating mutation plots.
Highly correlated genes for FGD5-AS1:
Showing top 20/521 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FGD5-AS1 | XPC | 0.743952 | 3 | 0 | 3 |
| FGD5-AS1 | CSDE1 | 0.716067 | 4 | 0 | 4 |
| FGD5-AS1 | NR2C2 | 0.71044 | 4 | 0 | 4 |
| FGD5-AS1 | CTDSPL | 0.709411 | 5 | 0 | 5 |
| FGD5-AS1 | PIK3R1 | 0.694577 | 5 | 0 | 5 |
| FGD5-AS1 | KBTBD3 | 0.687512 | 3 | 0 | 3 |
| FGD5-AS1 | KIAA2026 | 0.687425 | 3 | 0 | 3 |
| FGD5-AS1 | CAPN7 | 0.68578 | 7 | 0 | 7 |
| FGD5-AS1 | TRAK1 | 0.683442 | 3 | 0 | 3 |
| FGD5-AS1 | SH3BGRL | 0.681461 | 5 | 0 | 4 |
| FGD5-AS1 | TCAIM | 0.680969 | 4 | 0 | 4 |
| FGD5-AS1 | RBM47 | 0.676569 | 3 | 0 | 3 |
| FGD5-AS1 | SBF2 | 0.673476 | 3 | 0 | 3 |
| FGD5-AS1 | SLMAP | 0.66817 | 6 | 0 | 5 |
| FGD5-AS1 | MPRIP | 0.66586 | 4 | 0 | 4 |
| FGD5-AS1 | UBA3 | 0.66386 | 4 | 0 | 4 |
| FGD5-AS1 | ADCYAP1R1 | 0.66034 | 3 | 0 | 3 |
| FGD5-AS1 | MTMR6 | 0.659266 | 4 | 0 | 3 |
| FGD5-AS1 | ARL6IP5 | 0.658635 | 7 | 0 | 5 |
| FGD5-AS1 | ZNF717 | 0.655728 | 5 | 0 | 5 |
For details and further investigation, click here
